RNA–Protein interactions for RNA: ENST00000223336.10

COA1-201, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-201ENST00000223336 AEBP2Q6ZN18 517 aaPredicted RBP29.18■■■□□ 2.26
COA1-201ENST00000223336 CHIC1Q5VXU3 224 aa27.38■■□□□ 1.97
COA1-201ENST00000223336 SENP3Q9H4L4 574 aaPredicted RBP24.99■■□□□ 1.59
COA1-201ENST00000223336 PHF23Q9BUL5 403 aaPredicted RBP24.56■■□□□ 1.52
COA1-201ENST00000223336 FOXD1Q16676 465 aa23.3■■□□□ 1.32
COA1-201ENST00000223336 POTEDQ86YR6 584 aa22.07■■□□□ 1.12
COA1-201ENST00000223336 MSH5O43196 834 aa22■■□□□ 1.11
COA1-201ENST00000223336 PLPPR3Q6T4P5 718 aa21.71■■□□□ 1.07
COA1-201ENST00000223336 PIAS4Q8N2W9 510 aaPredicted RBP21.67■■□□□ 1.06
COA1-201ENST00000223336 PPP6R1Q9UPN7 881 aa21.47■■□□□ 1.03
COA1-201ENST00000223336 ADRA2BP18089 450 aa21.36■■□□□ 1.01
COA1-201ENST00000223336 DMRT2Q9Y5R5 561 aa19.77■□□□□ 0.76
COA1-201ENST00000223336 MAPK8IP2Q13387 824 aaPredicted RBP19.71■□□□□ 0.75
COA1-201ENST00000223336 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
COA1-201ENST00000223336 CACNB1Q02641 598 aaPredicted RBP19.03■□□□□ 0.64
COA1-201ENST00000223336 PPP4R3CPQ6ZMV5 832 aa18.95■□□□□ 0.62
COA1-201ENST00000223336 HOXD11P31277 338 aaPredicted RBP18.91■□□□□ 0.62
COA1-201ENST00000223336 DCAF8L1A6NGE4 600 aa18.84■□□□□ 0.61
COA1-201ENST00000223336 RNF39Q9H2S5 420 aa18.73■□□□□ 0.59
COA1-201ENST00000223336 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
COA1-201ENST00000223336 RNF216Q9NWF9 866 aaPredicted RBP18.66■□□□□ 0.58
COA1-201ENST00000223336 C1QBPQ07021 282 aaKnown RBP18.45■□□□□ 0.54
COA1-201ENST00000223336 DNAJC5BQ9UF47 199 aa18.42■□□□□ 0.54
COA1-201ENST00000223336 NCBP3Q53F19 620 aaKnown RBP18.13■□□□□ 0.49
COA1-201ENST00000223336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.466e-13■■□□□ 11.6
COA1-201ENST00000223336 NPM3O75607 178 aaKnown RBP17.85■□□□□ 0.45
COA1-201ENST00000223336 U3KPZ7 1027 aaPredicted RBP17.56■□□□□ 0.4
COA1-201ENST00000223336 DSG3P32926 999 aa17.39■□□□□ 0.37
COA1-201ENST00000223336 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
COA1-201ENST00000223336 CAPN15O75808 1086 aa17.35■□□□□ 0.37
COA1-201ENST00000223336 POTEHQ6S545 545 aa17.22■□□□□ 0.35
COA1-201ENST00000223336 SLC4A2P04920 1241 aa17.15■□□□□ 0.34
COA1-201ENST00000223336 KCNA4P22459 653 aa17.14■□□□□ 0.33
COA1-201ENST00000223336 APLP2Q06481 763 aa17.07■□□□□ 0.32
COA1-201ENST00000223336 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
COA1-201ENST00000223336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
COA1-201ENST00000223336 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
COA1-201ENST00000223336 HNRNPUL2Q1KMD3 747 aaKnown RBP16.95■□□□□ 0.3
COA1-201ENST00000223336 ABCB7O75027 752 aa16.9■□□□□ 0.3
COA1-201ENST00000223336 SAMD1Q6SPF0 538 aaPredicted RBP16.83■□□□□ 0.28
COA1-201ENST00000223336 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
COA1-201ENST00000223336 MYCNP04198 464 aaPredicted RBP16.55■□□□□ 0.24
COA1-201ENST00000223336 POLA2Q14181 598 aa16.45■□□□□ 0.22
COA1-201ENST00000223336 CHRDL2Q6WN34 429 aa16.38■□□□□ 0.21
COA1-201ENST00000223336 ZBTB12Q9Y330 459 aaPredicted RBP16.17■□□□□ 0.18
COA1-201ENST00000223336 AKT1S1Q96B36 256 aa16.16■□□□□ 0.18
COA1-201ENST00000223336 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
COA1-201ENST00000223336 ATF5Q9Y2D1 282 aaPredicted RBP16.13■□□□□ 0.17
COA1-201ENST00000223336 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
COA1-201ENST00000223336 SP7Q8TDD2 431 aaPredicted RBP15.98■□□□□ 0.15
COA1-201ENST00000223336 REM2Q8IYK8 340 aaPredicted RBP15.97■□□□□ 0.15
COA1-201ENST00000223336 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
COA1-201ENST00000223336 PIP4P2Q8N4L2 257 aa15.91■□□□□ 0.14
COA1-201ENST00000223336 PITPNM1O00562 1244 aa15.82■□□□□ 0.12
COA1-201ENST00000223336 FXR2P51116 673 aaKnown RBP eCLIP15.79■□□□□ 0.12
COA1-201ENST00000223336 ZBTB22O15209 634 aa15.77■□□□□ 0.12
COA1-201ENST00000223336 ATXN8OSP0DMR3 200 aa15.75■□□□□ 0.11
COA1-201ENST00000223336 HAX1O00165 279 aa15.67■□□□□ 0.1
COA1-201ENST00000223336 SPDYE2BA6NHP3 402 aa15.63■□□□□ 0.09
COA1-201ENST00000223336 SPDYE6P0CI01 402 aa15.63■□□□□ 0.09
COA1-201ENST00000223336 SPDYE2Q495Y8 402 aa15.63■□□□□ 0.09
COA1-201ENST00000223336 FBLN2P98095 1184 aa15.56■□□□□ 0.08
COA1-201ENST00000223336 EVX2Q03828 476 aa15.46■□□□□ 0.07
COA1-201ENST00000223336 SPDYE1Q8NFV5 336 aaPredicted RBP15.42■□□□□ 0.06
COA1-201ENST00000223336 MKRN4PQ13434 485 aaPredicted RBP15.41■□□□□ 0.06
COA1-201ENST00000223336 SSUH2Q9Y2M2 353 aa15.39■□□□□ 0.05
COA1-201ENST00000223336 PRKAR2AP13861 404 aaKnown RBP15.38■□□□□ 0.05
COA1-201ENST00000223336 CLEC11AQ9Y240 323 aa15.33■□□□□ 0.04
COA1-201ENST00000223336 ZNF692Q9BU19 519 aaPredicted RBP15.31■□□□□ 0.04
COA1-201ENST00000223336 C19orf67A6NJJ6 358 aa15.3■□□□□ 0.04
COA1-201ENST00000223336 GABBR2O75899 941 aa15.12■□□□□ 0.01
COA1-201ENST00000223336 CHADLQ6NUI6 762 aa15.09■□□□□ 0.01
COA1-201ENST00000223336 PABPN1Q86U42 306 aaKnown RBP eCLIP15.07■□□□□ 0
COA1-201ENST00000223336 PRR29P0C7W0 189 aa15.06■□□□□ 0
COA1-201ENST00000223336 LHX8Q68G74 356 aa14.95□□□□□ -0.02
COA1-201ENST00000223336 CD44P16070 742 aaKnown RBP14.88□□□□□ -0.03
COA1-201ENST00000223336 FARP1Q9Y4F1 1045 aaPredicted RBP14.88□□□□□ -0.03
COA1-201ENST00000223336 CLCN6P51797 869 aa14.85□□□□□ -0.03
COA1-201ENST00000223336 POTEIP0CG38 1075 aa14.8□□□□□ -0.04
COA1-201ENST00000223336 ZNF579Q8NAF0 562 aaKnown RBP14.69□□□□□ -0.06
COA1-201ENST00000223336 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
COA1-201ENST00000223336 STAG3Q9UJ98 1225 aa14.64□□□□□ -0.07
COA1-201ENST00000223336 CREBZFQ9NS37 354 aa14.63□□□□□ -0.07
COA1-201ENST00000223336 DCBLD2Q96PD2 775 aa14.61□□□□□ -0.07
COA1-201ENST00000223336 ZRANB1Q9UGI0 708 aa14.59□□□□□ -0.07
COA1-201ENST00000223336 SPDYE4A6NLX3 237 aa14.47□□□□□ -0.09
COA1-201ENST00000223336 GALR2O43603 387 aaPredicted RBP14.47□□□□□ -0.09
COA1-201ENST00000223336 PAK3O75914 559 aaPredicted RBP14.41□□□□□ -0.1
COA1-201ENST00000223336 MNX1P50219 401 aaPredicted RBP14.37□□□□□ -0.11
COA1-201ENST00000223336 NPM1P06748 294 aaKnown RBP eCLIP14.35□□□□□ -0.11
COA1-201ENST00000223336 PHF12Q96QT6 1004 aa14.35□□□□□ -0.11
COA1-201ENST00000223336 OTUD5Q96G74 571 aa14.33□□□□□ -0.12
COA1-201ENST00000223336 POTEB2H3BUK9 544 aa14.29□□□□□ -0.12
COA1-201ENST00000223336 EHMT2Q96KQ7 1210 aa14.23□□□□□ -0.13
COA1-201ENST00000223336 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
COA1-201ENST00000223336 PLSCR2Q9NRY7 297 aa14.22□□□□□ -0.13
COA1-201ENST00000223336 ASTLQ6HA08 431 aaPredicted RBP14.21□□□□□ -0.13
COA1-201ENST00000223336 PROM2Q8N271 834 aa14.17□□□□□ -0.14
COA1-201ENST00000223336 MS4A3Q96HJ5 214 aa14.17□□□□□ -0.14
COA1-201ENST00000223336 ATMINO43313 823 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms