RNA–Protein interactions for RNA: ENST00000420441.1

COA1-207, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 2

Gene COA1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-207ENST00000420441 AEBP2Q6ZN18 517 aaPredicted RBP20.48■□□□□ 0.87
COA1-207ENST00000420441 CHIC1Q5VXU3 224 aa19.25■□□□□ 0.67
COA1-207ENST00000420441 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
COA1-207ENST00000420441 PHF23Q9BUL5 403 aaPredicted RBP17.18■□□□□ 0.34
COA1-207ENST00000420441 FOXD1Q16676 465 aa16.28■□□□□ 0.2
COA1-207ENST00000420441 PLPPR3Q6T4P5 718 aa15.3■□□□□ 0.04
COA1-207ENST00000420441 PPP6R1Q9UPN7 881 aa15.21■□□□□ 0.03
COA1-207ENST00000420441 PIAS4Q8N2W9 510 aaPredicted RBP15.2■□□□□ 0.02
COA1-207ENST00000420441 ADRA2BP18089 450 aa15.17■□□□□ 0.02
COA1-207ENST00000420441 MSH5O43196 834 aa15.14■□□□□ 0.01
COA1-207ENST00000420441 POTEDQ86YR6 584 aa15.06■□□□□ 0
COA1-207ENST00000420441 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
COA1-207ENST00000420441 DMRT2Q9Y5R5 561 aa13.75□□□□□ -0.21
COA1-207ENST00000420441 SCAF1Q9H7N4 1312 aaKnown RBP13.67□□□□□ -0.22
COA1-207ENST00000420441 PPP4R3CPQ6ZMV5 832 aa13.47□□□□□ -0.25
COA1-207ENST00000420441 DCAF8L1A6NGE4 600 aa13.35□□□□□ -0.27
COA1-207ENST00000420441 HOXD11P31277 338 aaPredicted RBP13.18□□□□□ -0.3
COA1-207ENST00000420441 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
COA1-207ENST00000420441 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
COA1-207ENST00000420441 RNF216Q9NWF9 866 aaPredicted RBP13.05□□□□□ -0.32
COA1-207ENST00000420441 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
COA1-207ENST00000420441 NCBP3Q53F19 620 aaKnown RBP12.82□□□□□ -0.36
COA1-207ENST00000420441 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
COA1-207ENST00000420441 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
COA1-207ENST00000420441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.38
COA1-207ENST00000420441 DNAJC5BQ9UF47 199 aa12.58□□□□□ -0.4
COA1-207ENST00000420441 KCNA4P22459 653 aa12.49□□□□□ -0.41
COA1-207ENST00000420441 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
COA1-207ENST00000420441 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
COA1-207ENST00000420441 CAPN15O75808 1086 aa12.24□□□□□ -0.45
COA1-207ENST00000420441 SLC4A2P04920 1241 aa12.22□□□□□ -0.45
COA1-207ENST00000420441 DSG3P32926 999 aa12.14□□□□□ -0.47
COA1-207ENST00000420441 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
COA1-207ENST00000420441 ABCB7O75027 752 aa12.03□□□□□ -0.48
COA1-207ENST00000420441 ZNF219Q9P2Y4 722 aaPredicted RBP11.87□□□□□ -0.51
COA1-207ENST00000420441 NISCHQ9Y2I1 1504 aa11.85□□□□□ -0.51
COA1-207ENST00000420441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
COA1-207ENST00000420441 APLP2Q06481 763 aa11.83□□□□□ -0.52
COA1-207ENST00000420441 HNRNPUL2Q1KMD3 747 aaKnown RBP11.83□□□□□ -0.52
COA1-207ENST00000420441 SAMD1Q6SPF0 538 aaPredicted RBP11.81□□□□□ -0.52
COA1-207ENST00000420441 POTEHQ6S545 545 aa11.77□□□□□ -0.53
COA1-207ENST00000420441 MYCNP04198 464 aaPredicted RBP11.73□□□□□ -0.53
COA1-207ENST00000420441 SLC4A1APQ9BWU0 796 aaKnown RBP11.72□□□□□ -0.53
COA1-207ENST00000420441 POLA2Q14181 598 aa11.67□□□□□ -0.54
COA1-207ENST00000420441 ATF5Q9Y2D1 282 aaPredicted RBP11.63□□□□□ -0.55
COA1-207ENST00000420441 FOXD4L1Q9NU39 408 aa11.58□□□□□ -0.56
COA1-207ENST00000420441 ZBTB22O15209 634 aa11.51□□□□□ -0.57
COA1-207ENST00000420441 RBM42Q9BTD8 480 aaKnown RBP11.48□□□□□ -0.57
COA1-207ENST00000420441 CHRDL2Q6WN34 429 aa11.37□□□□□ -0.59
COA1-207ENST00000420441 OSCARQ8IYS5 282 aa11.33□□□□□ -0.6
COA1-207ENST00000420441 ZBTB12Q9Y330 459 aaPredicted RBP11.25□□□□□ -0.61
COA1-207ENST00000420441 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
COA1-207ENST00000420441 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
COA1-207ENST00000420441 ATXN8OSP0DMR3 200 aa11.12□□□□□ -0.63
COA1-207ENST00000420441 PITPNM1O00562 1244 aa11.11□□□□□ -0.63
COA1-207ENST00000420441 PIP4P2Q8N4L2 257 aa11.1□□□□□ -0.63
COA1-207ENST00000420441 MKRN4PQ13434 485 aaPredicted RBP11.03□□□□□ -0.64
COA1-207ENST00000420441 FBLN2P98095 1184 aa11.02□□□□□ -0.65
COA1-207ENST00000420441 SP7Q8TDD2 431 aaPredicted RBP10.97□□□□□ -0.65
COA1-207ENST00000420441 FXR2P51116 673 aaKnown RBP eCLIP10.96□□□□□ -0.65
COA1-207ENST00000420441 SPDYE2BA6NHP3 402 aa10.95□□□□□ -0.66
COA1-207ENST00000420441 HAX1O00165 279 aa10.95□□□□□ -0.66
COA1-207ENST00000420441 SPDYE6P0CI01 402 aa10.95□□□□□ -0.66
COA1-207ENST00000420441 SPDYE2Q495Y8 402 aa10.95□□□□□ -0.66
COA1-207ENST00000420441 ABCC9O60706 1549 aa10.94□□□□□ -0.66
COA1-207ENST00000420441 CLEC11AQ9Y240 323 aa10.92□□□□□ -0.66
COA1-207ENST00000420441 ZNF692Q9BU19 519 aaPredicted RBP10.89□□□□□ -0.67
COA1-207ENST00000420441 EVX2Q03828 476 aa10.87□□□□□ -0.67
COA1-207ENST00000420441 CSRNP3Q8WYN3 585 aa10.85□□□□□ -0.67
COA1-207ENST00000420441 PRKAR2AP13861 404 aaKnown RBP10.82□□□□□ -0.68
COA1-207ENST00000420441 SSUH2Q9Y2M2 353 aa10.82□□□□□ -0.68
COA1-207ENST00000420441 SPDYE1Q8NFV5 336 aaPredicted RBP10.81□□□□□ -0.68
COA1-207ENST00000420441 CHADLQ6NUI6 762 aa10.76□□□□□ -0.69
COA1-207ENST00000420441 EHMT2Q96KQ7 1210 aa10.76□□□□□ -0.69
COA1-207ENST00000420441 PABPN1Q86U42 306 aaKnown RBP eCLIP10.75□□□□□ -0.69
COA1-207ENST00000420441 PRR29P0C7W0 189 aa10.65□□□□□ -0.7
COA1-207ENST00000420441 CCDC180Q9P1Z9 1646 aa10.64□□□□□ -0.71
COA1-207ENST00000420441 C19orf67A6NJJ6 358 aa10.62□□□□□ -0.71
COA1-207ENST00000420441 GABBR2O75899 941 aa10.53□□□□□ -0.72
COA1-207ENST00000420441 FARP1Q9Y4F1 1045 aaPredicted RBP10.48□□□□□ -0.73
COA1-207ENST00000420441 CD44P16070 742 aaKnown RBP10.46□□□□□ -0.73
COA1-207ENST00000420441 SPDYE4A6NLX3 237 aa10.43□□□□□ -0.74
COA1-207ENST00000420441 CREBZFQ9NS37 354 aa10.39□□□□□ -0.75
COA1-207ENST00000420441 DCAF8L2P0C7V8 631 aa10.36□□□□□ -0.75
COA1-207ENST00000420441 POTEIP0CG38 1075 aa10.35□□□□□ -0.75
COA1-207ENST00000420441 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
COA1-207ENST00000420441 LHX8Q68G74 356 aa10.31□□□□□ -0.76
COA1-207ENST00000420441 STAG3Q9UJ98 1225 aa10.29□□□□□ -0.76
COA1-207ENST00000420441 RB1CC1Q8TDY2 1594 aa10.26□□□□□ -0.77
COA1-207ENST00000420441 ZNF579Q8NAF0 562 aaKnown RBP10.23□□□□□ -0.77
COA1-207ENST00000420441 GALR2O43603 387 aaPredicted RBP10.22□□□□□ -0.77
COA1-207ENST00000420441 DCBLD2Q96PD2 775 aa10.22□□□□□ -0.77
COA1-207ENST00000420441 PHF12Q96QT6 1004 aa10.22□□□□□ -0.77
COA1-207ENST00000420441 MNX1P50219 401 aaPredicted RBP10.18□□□□□ -0.78
COA1-207ENST00000420441 PAK3O75914 559 aaPredicted RBP10.13□□□□□ -0.79
COA1-207ENST00000420441 NACADO15069 1562 aa10.1□□□□□ -0.79
COA1-207ENST00000420441 NPM1P06748 294 aaKnown RBP eCLIP10.1□□□□□ -0.79
COA1-207ENST00000420441 CLCN6P51797 869 aa10.1□□□□□ -0.79
COA1-207ENST00000420441 TSPYL2Q9H2G4 693 aaPredicted RBP10.08□□□□□ -0.8
COA1-207ENST00000420441 PROM2Q8N271 834 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms