Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6CP48668 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6CP48668 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
KRT6CP48668 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KRT6CP48668 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KRT6CP48668 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6CP48668 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6CP48668 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KRT6CP48668 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.3■□□□□ 0.2
KRT6CP48668 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT6CP48668 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT6CP48668 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6CP48668 FGFR3P6-201ENST00000457012 610 ntBASIC16.3■□□□□ 0.2
KRT6CP48668 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT6CP48668 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT6CP48668 SART3-203ENST00000546611 1184 ntBASIC16.3■□□□□ 0.2
KRT6CP48668 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6CP48668 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.3■□□□□ 0.2
KRT6CP48668 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6CP48668 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6CP48668 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT6CP48668 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT6CP48668 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6CP48668 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT6CP48668 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KRT6CP48668 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT6CP48668 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
KRT6CP48668 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6CP48668 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
KRT6CP48668 DOC2GP-204ENST00000639052 2548 ntBASIC16.29■□□□□ 0.2
KRT6CP48668 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT6CP48668 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
KRT6CP48668 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT6CP48668 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
KRT6CP48668 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
KRT6CP48668 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT6CP48668 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
KRT6CP48668 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT6CP48668 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.29■□□□□ 0.2
KRT6CP48668 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.29■□□□□ 0.2
KRT6CP48668 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
KRT6CP48668 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.29■□□□□ 0.2
KRT6CP48668 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT6CP48668 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT6CP48668 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.29■□□□□ 0.2
KRT6CP48668 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 REXO1L6P-202ENST00000619970 1078 ntBASIC16.29■□□□□ 0.2
KRT6CP48668 AC004706.3-202ENST00000621574 984 ntBASIC16.29■□□□□ 0.2
KRT6CP48668 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT6CP48668 AF228730.7-201ENST00000641842 219 ntBASIC16.29■□□□□ 0.2
KRT6CP48668 AC006449.5-201ENST00000610658 2098 ntBASIC16.29■□□□□ 0.2
KRT6CP48668 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT6CP48668 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
KRT6CP48668 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6CP48668 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
KRT6CP48668 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms