Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.44■□□□□ 0.86
RFX5P48382 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.44■□□□□ 0.86
RFX5P48382 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX5P48382 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX5P48382 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX5P48382 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX5P48382 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX5P48382 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX5P48382 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.43■□□□□ 0.86
RFX5P48382 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFX5P48382 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.43■□□□□ 0.86
RFX5P48382 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX5P48382 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFX5P48382 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX5P48382 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.43■□□□□ 0.86
RFX5P48382 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.43■□□□□ 0.86
RFX5P48382 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.43■□□□□ 0.86
RFX5P48382 HMGN1P19-201ENST00000436976 333 ntBASIC20.43■□□□□ 0.86
RFX5P48382 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX5P48382 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.43■□□□□ 0.86
RFX5P48382 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
RFX5P48382 AC051619.7-201ENST00000568314 623 ntBASIC20.43■□□□□ 0.86
RFX5P48382 AC020765.3-201ENST00000613051 740 ntBASIC20.43■□□□□ 0.86
RFX5P48382 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.43■□□□□ 0.86
RFX5P48382 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.43■□□□□ 0.86
RFX5P48382 AD000864.1-201ENST00000624076 2295 ntBASIC20.43■□□□□ 0.86
RFX5P48382 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX5P48382 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX5P48382 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
RFX5P48382 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX5P48382 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX5P48382 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.43■□□□□ 0.86
RFX5P48382 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX5P48382 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX5P48382 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX5P48382 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX5P48382 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX5P48382 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
RFX5P48382 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
RFX5P48382 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RFX5P48382 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RFX5P48382 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX5P48382 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RFX5P48382 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX5P48382 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX5P48382 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX5P48382 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX5P48382 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX5P48382 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.42■□□□□ 0.86
RFX5P48382 AC025678.2-201ENST00000562061 970 ntBASIC20.42■□□□□ 0.86
RFX5P48382 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.42■□□□□ 0.86
RFX5P48382 AC106028.4-201ENST00000614509 607 ntBASIC20.42■□□□□ 0.86
RFX5P48382 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX5P48382 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX5P48382 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX5P48382 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
RFX5P48382 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX5P48382 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX5P48382 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX5P48382 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX5P48382 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX5P48382 PCDHA12-202ENST00000613593 2588 ntBASIC20.41■□□□□ 0.86
RFX5P48382 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.41■□□□□ 0.86
RFX5P48382 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.41■□□□□ 0.86
RFX5P48382 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.41■□□□□ 0.86
RFX5P48382 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.41■□□□□ 0.86
RFX5P48382 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.41■□□□□ 0.86
RFX5P48382 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.41■□□□□ 0.86
RFX5P48382 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.41■□□□□ 0.86
RFX5P48382 AL390955.2-201ENST00000603032 514 ntBASIC20.41■□□□□ 0.86
RFX5P48382 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RFX5P48382 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RFX5P48382 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.41■□□□□ 0.86
RFX5P48382 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX5P48382 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX5P48382 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX5P48382 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RFX5P48382 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX5P48382 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX5P48382 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX5P48382 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX5P48382 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX5P48382 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms