Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HADHAP40939 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17■□□□□ 0.31
HADHAP40939 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
HADHAP40939 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17■□□□□ 0.31
HADHAP40939 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17■□□□□ 0.31
HADHAP40939 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17■□□□□ 0.31
HADHAP40939 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17■□□□□ 0.31
HADHAP40939 AC148477.8-201ENST00000624298 468 ntBASIC17■□□□□ 0.31
HADHAP40939 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HADHAP40939 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HADHAP40939 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17■□□□□ 0.31
HADHAP40939 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17■□□□□ 0.31
HADHAP40939 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17■□□□□ 0.31
HADHAP40939 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17■□□□□ 0.31
HADHAP40939 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
HADHAP40939 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
HADHAP40939 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HADHAP40939 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17■□□□□ 0.31
HADHAP40939 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17■□□□□ 0.31
HADHAP40939 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HADHAP40939 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HADHAP40939 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17■□□□□ 0.31
HADHAP40939 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HADHAP40939 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HADHAP40939 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.99■□□□□ 0.31
HADHAP40939 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.99■□□□□ 0.31
HADHAP40939 KRT8P49-201ENST00000604166 1432 ntBASIC16.99■□□□□ 0.31
HADHAP40939 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.99■□□□□ 0.31
HADHAP40939 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.99■□□□□ 0.31
HADHAP40939 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.99■□□□□ 0.31
HADHAP40939 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.99■□□□□ 0.31
HADHAP40939 AC087163.2-201ENST00000457299 853 ntBASIC16.99■□□□□ 0.31
HADHAP40939 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.99■□□□□ 0.31
HADHAP40939 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.99■□□□□ 0.31
HADHAP40939 DUX4L17-201ENST00000557360 1267 ntBASIC16.99■□□□□ 0.31
HADHAP40939 AC008667.4-201ENST00000607370 168 ntBASIC16.99■□□□□ 0.31
HADHAP40939 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.99■□□□□ 0.31
HADHAP40939 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.99■□□□□ 0.31
HADHAP40939 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HADHAP40939 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
HADHAP40939 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 HLA-A-202ENST00000376806 1854 ntBASIC16.99■□□□□ 0.31
HADHAP40939 AL645728.1-201ENST00000366221 2101 ntBASIC16.99■□□□□ 0.31
HADHAP40939 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
HADHAP40939 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HADHAP40939 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HADHAP40939 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HADHAP40939 AC006449.5-201ENST00000610658 2098 ntBASIC16.98■□□□□ 0.31
HADHAP40939 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HADHAP40939 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.98■□□□□ 0.31
HADHAP40939 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.98■□□□□ 0.31
HADHAP40939 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HADHAP40939 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
HADHAP40939 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HADHAP40939 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HADHAP40939 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.98■□□□□ 0.31
HADHAP40939 HLA-J-202ENST00000469281 1241 ntBASIC16.98■□□□□ 0.31
HADHAP40939 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.98■□□□□ 0.31
HADHAP40939 AC012640.2-201ENST00000561606 901 ntBASIC16.98■□□□□ 0.31
HADHAP40939 AP001005.1-201ENST00000571755 1248 ntBASIC16.98■□□□□ 0.31
HADHAP40939 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.98■□□□□ 0.31
HADHAP40939 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.98■□□□□ 0.31
HADHAP40939 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HADHAP40939 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HADHAP40939 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HADHAP40939 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HADHAP40939 LINC00895-201ENST00000629028 1637 ntBASIC16.98■□□□□ 0.31
HADHAP40939 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
HADHAP40939 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
HADHAP40939 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HADHAP40939 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HADHAP40939 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HADHAP40939 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HADHAP40939 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HADHAP40939 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HADHAP40939 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.98■□□□□ 0.31
HADHAP40939 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HADHAP40939 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HADHAP40939 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.97■□□□□ 0.31
HADHAP40939 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.97■□□□□ 0.31
HADHAP40939 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms