Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 MTHFR-217ENST00000641820 1569 ntBASIC16.65■□□□□ 0.26
GABRB3P28472 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
GABRB3P28472 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.65■□□□□ 0.26
GABRB3P28472 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.65■□□□□ 0.26
GABRB3P28472 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.65■□□□□ 0.26
GABRB3P28472 GGTLC5P-201ENST00000617623 998 ntBASIC16.65■□□□□ 0.26
GABRB3P28472 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
GABRB3P28472 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.65■□□□□ 0.26
GABRB3P28472 AL353732.1-201ENST00000569618 1459 ntBASIC16.65■□□□□ 0.26
GABRB3P28472 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.65■□□□□ 0.26
GABRB3P28472 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GABRB3P28472 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABRB3P28472 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
GABRB3P28472 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
GABRB3P28472 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
GABRB3P28472 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
GABRB3P28472 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GABRB3P28472 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GABRB3P28472 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.64■□□□□ 0.25
GABRB3P28472 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GABRB3P28472 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GABRB3P28472 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
GABRB3P28472 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.64■□□□□ 0.25
GABRB3P28472 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.64■□□□□ 0.25
GABRB3P28472 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.64■□□□□ 0.25
GABRB3P28472 AC079781.3-201ENST00000449110 356 ntBASIC16.64■□□□□ 0.25
GABRB3P28472 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.64■□□□□ 0.25
GABRB3P28472 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.64■□□□□ 0.25
GABRB3P28472 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.64■□□□□ 0.25
GABRB3P28472 AC105339.3-201ENST00000560043 636 ntBASIC16.64■□□□□ 0.25
GABRB3P28472 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.64■□□□□ 0.25
GABRB3P28472 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 AL356488.2-201ENST00000602755 427 ntBASIC16.64■□□□□ 0.25
GABRB3P28472 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.64■□□□□ 0.25
GABRB3P28472 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.64■□□□□ 0.25
GABRB3P28472 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.64■□□□□ 0.25
GABRB3P28472 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GABRB3P28472 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.64■□□□□ 0.25
GABRB3P28472 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.64■□□□□ 0.25
GABRB3P28472 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.64■□□□□ 0.25
GABRB3P28472 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
GABRB3P28472 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.64■□□□□ 0.25
GABRB3P28472 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRB3P28472 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.64■□□□□ 0.25
GABRB3P28472 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABRB3P28472 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GABRB3P28472 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABRB3P28472 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.63■□□□□ 0.25
GABRB3P28472 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GABRB3P28472 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.63■□□□□ 0.25
GABRB3P28472 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GABRB3P28472 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABRB3P28472 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABRB3P28472 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABRB3P28472 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.63■□□□□ 0.25
GABRB3P28472 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.63■□□□□ 0.25
GABRB3P28472 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.63■□□□□ 0.25
GABRB3P28472 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.63■□□□□ 0.25
GABRB3P28472 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABRB3P28472 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.63■□□□□ 0.25
GABRB3P28472 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.63■□□□□ 0.25
GABRB3P28472 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.63■□□□□ 0.25
GABRB3P28472 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.63■□□□□ 0.25
GABRB3P28472 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.63■□□□□ 0.25
GABRB3P28472 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.63■□□□□ 0.25
GABRB3P28472 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.63■□□□□ 0.25
GABRB3P28472 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms