Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT3P12035 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
KRT3P12035 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.68■□□□□ 0.42
KRT3P12035 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.68■□□□□ 0.42
KRT3P12035 PMS2P1-201ENST00000431037 1228 ntBASIC17.68■□□□□ 0.42
KRT3P12035 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT3P12035 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.68■□□□□ 0.42
KRT3P12035 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT3P12035 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT3P12035 OR7E47P-204ENST00000575924 449 ntBASIC17.68■□□□□ 0.42
KRT3P12035 AC005412.3-201ENST00000580309 715 ntBASIC17.68■□□□□ 0.42
KRT3P12035 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.68■□□□□ 0.42
KRT3P12035 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.68■□□□□ 0.42
KRT3P12035 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.68■□□□□ 0.42
KRT3P12035 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.68■□□□□ 0.42
KRT3P12035 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
KRT3P12035 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 HLA-A-201ENST00000376802 1334 ntBASIC17.68■□□□□ 0.42
KRT3P12035 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
KRT3P12035 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
KRT3P12035 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KRT3P12035 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
KRT3P12035 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT3P12035 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
KRT3P12035 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT3P12035 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
KRT3P12035 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
KRT3P12035 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KRT3P12035 AC108751.1-201ENST00000490852 363 ntBASIC17.67■□□□□ 0.42
KRT3P12035 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT3P12035 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
KRT3P12035 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.67■□□□□ 0.42
KRT3P12035 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT3P12035 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT3P12035 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT3P12035 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT3P12035 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT3P12035 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT3P12035 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT3P12035 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT3P12035 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT3P12035 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.66■□□□□ 0.42
KRT3P12035 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT3P12035 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT3P12035 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT3P12035 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KRT3P12035 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT3P12035 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT3P12035 PRSS29P-201ENST00000440800 595 ntBASIC17.66■□□□□ 0.42
KRT3P12035 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT3P12035 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT3P12035 UNC93B6-202ENST00000528242 690 ntBASIC17.66■□□□□ 0.42
KRT3P12035 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT3P12035 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT3P12035 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
KRT3P12035 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
KRT3P12035 AC010654.1-201ENST00000615722 808 ntBASIC17.66■□□□□ 0.42
KRT3P12035 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.66■□□□□ 0.42
KRT3P12035 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT3P12035 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT3P12035 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT3P12035 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT3P12035 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT3P12035 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT3P12035 SNX33P1-201ENST00000592116 1762 ntBASIC17.66■□□□□ 0.42
KRT3P12035 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT3P12035 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT3P12035 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
KRT3P12035 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
KRT3P12035 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms