Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 AC139887.3-201ENST00000568585 713 ntBASIC18.19■□□□□ 0.5
CCDC172P0C7W6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 AC064862.7-201ENST00000604520 867 ntBASIC18.19■□□□□ 0.5
CCDC172P0C7W6 AL139424.1-201ENST00000607572 797 ntBASIC18.19■□□□□ 0.5
CCDC172P0C7W6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 AC023824.1-201ENST00000562945 2975 ntBASIC18.19■□□□□ 0.5
CCDC172P0C7W6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 AC006538.1-201ENST00000567905 1585 ntBASIC18.18■□□□□ 0.5
CCDC172P0C7W6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 UPK3BP1-201ENST00000428678 509 ntBASIC18.18■□□□□ 0.5
CCDC172P0C7W6 SCARNA2-201ENST00000458748 420 ntBASIC18.18■□□□□ 0.5
CCDC172P0C7W6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 LINC01711-201ENST00000598340 967 ntBASIC18.18■□□□□ 0.5
CCDC172P0C7W6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC172P0C7W6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 HYMAI-201ENST00000635591 3347 ntBASIC18.17■□□□□ 0.5
CCDC172P0C7W6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 MIR1224-201ENST00000408193 85 ntBASIC18.17■□□□□ 0.5
CCDC172P0C7W6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 AL355877.3-201ENST00000622820 899 ntBASIC18.17■□□□□ 0.5
CCDC172P0C7W6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 DOC2GP-204ENST00000639052 2548 ntBASIC18.17■□□□□ 0.5
CCDC172P0C7W6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 TOP3BP1-201ENST00000420768 1380 ntBASIC18.17■□□□□ 0.5
CCDC172P0C7W6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.17■□□□□ 0.5
CCDC172P0C7W6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC172P0C7W6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms