Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINGO3P0C6S8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINGO3P0C6S8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINGO3P0C6S8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINGO3P0C6S8 DDX43P3-201ENST00000441064 443 ntBASIC16.29■□□□□ 0.2
LINGO3P0C6S8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.29■□□□□ 0.2
LINGO3P0C6S8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.29■□□□□ 0.2
LINGO3P0C6S8 AL592071.1-201ENST00000611956 408 ntBASIC16.29■□□□□ 0.2
LINGO3P0C6S8 IGHV3-41-201ENST00000613121 348 ntBASIC16.29■□□□□ 0.2
LINGO3P0C6S8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINGO3P0C6S8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINGO3P0C6S8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LINGO3P0C6S8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
LINGO3P0C6S8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LINGO3P0C6S8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINGO3P0C6S8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.29■□□□□ 0.2
LINGO3P0C6S8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINGO3P0C6S8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.29■□□□□ 0.2
LINGO3P0C6S8 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 AC069148.1-201ENST00000608741 768 ntBASIC16.28■□□□□ 0.2
LINGO3P0C6S8 AC124864.1-201ENST00000623408 392 ntBASIC16.28■□□□□ 0.2
LINGO3P0C6S8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINGO3P0C6S8 AL137784.3-201ENST00000623858 2288 ntBASIC16.28■□□□□ 0.2
LINGO3P0C6S8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.27■□□□□ 0.2
LINGO3P0C6S8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 AP002383.4-201ENST00000442518 975 ntBASIC16.27■□□□□ 0.2
LINGO3P0C6S8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 AL353801.3-201ENST00000609898 542 ntBASIC16.27■□□□□ 0.2
LINGO3P0C6S8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.27■□□□□ 0.2
LINGO3P0C6S8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINGO3P0C6S8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms