Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
COL5A2P05997 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL5A2P05997 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
COL5A2P05997 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL5A2P05997 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
COL5A2P05997 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL5A2P05997 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.69■■□□□ 1.06
COL5A2P05997 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC21.69■■□□□ 1.06
COL5A2P05997 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.69■■□□□ 1.06
COL5A2P05997 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL5A2P05997 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL5A2P05997 AL133338.1-201ENST00000565695 1517 ntBASIC21.69■■□□□ 1.06
COL5A2P05997 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL5A2P05997 NSL1-201ENST00000366976 722 ntTSL 2 BASIC21.69■■□□□ 1.06
COL5A2P05997 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC21.69■■□□□ 1.06
COL5A2P05997 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC21.69■■□□□ 1.06
COL5A2P05997 PTK7-212ENST00000476760 902 ntTSL 2 BASIC21.69■■□□□ 1.06
COL5A2P05997 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL5A2P05997 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL5A2P05997 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
COL5A2P05997 AC087289.5-201ENST00000586076 3175 ntBASIC21.68■■□□□ 1.06
COL5A2P05997 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
COL5A2P05997 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 CLK3P2-201ENST00000427566 1453 ntBASIC21.68■■□□□ 1.06
COL5A2P05997 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.68■■□□□ 1.06
COL5A2P05997 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC21.68■■□□□ 1.06
COL5A2P05997 AC018665.1-201ENST00000622927 1362 ntBASIC21.68■■□□□ 1.06
COL5A2P05997 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.68■■□□□ 1.06
COL5A2P05997 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.68■■□□□ 1.06
COL5A2P05997 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC21.68■■□□□ 1.06
COL5A2P05997 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
COL5A2P05997 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC21.68■■□□□ 1.06
COL5A2P05997 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC21.68■■□□□ 1.06
COL5A2P05997 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC21.68■■□□□ 1.06
COL5A2P05997 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC21.68■■□□□ 1.06
COL5A2P05997 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC21.68■■□□□ 1.06
COL5A2P05997 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC21.68■■□□□ 1.06
COL5A2P05997 PAM16-204ENST00000571941 674 ntTSL 3 BASIC21.68■■□□□ 1.06
COL5A2P05997 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 AL033527.5-201ENST00000641382 801 ntBASIC21.68■■□□□ 1.06
COL5A2P05997 AL139011.1-202ENST00000642063 584 ntBASIC21.68■■□□□ 1.06
COL5A2P05997 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL5A2P05997 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
COL5A2P05997 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
COL5A2P05997 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL5A2P05997 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
COL5A2P05997 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL5A2P05997 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
COL5A2P05997 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL5A2P05997 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC21.67■■□□□ 1.06
COL5A2P05997 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL5A2P05997 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.67■■□□□ 1.06
COL5A2P05997 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL5A2P05997 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL5A2P05997 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL5A2P05997 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL5A2P05997 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL5A2P05997 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
COL5A2P05997 HIST3H2BA-201ENST00000436555 524 ntBASIC21.67■■□□□ 1.06
COL5A2P05997 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC21.67■■□□□ 1.06
COL5A2P05997 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
COL5A2P05997 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC21.67■■□□□ 1.06
COL5A2P05997 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC21.67■■□□□ 1.06
COL5A2P05997 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL5A2P05997 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC21.67■■□□□ 1.06
COL5A2P05997 RPS24-214ENST00000613865 538 ntTSL 5 BASIC21.67■■□□□ 1.06
COL5A2P05997 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
COL5A2P05997 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL5A2P05997 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
COL5A2P05997 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
COL5A2P05997 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.67■■□□□ 1.06
COL5A2P05997 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC21.67■■□□□ 1.06
COL5A2P05997 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.67■■□□□ 1.06
COL5A2P05997 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC21.67■■□□□ 1.06
COL5A2P05997 AL512652.2-201ENST00000625156 1716 ntBASIC21.67■■□□□ 1.06
COL5A2P05997 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL5A2P05997 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.66■■□□□ 1.06
COL5A2P05997 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.66■■□□□ 1.06
COL5A2P05997 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
COL5A2P05997 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL5A2P05997 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
COL5A2P05997 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COL5A2P05997 FAM8A2P-201ENST00000528813 1142 ntBASIC21.66■■□□□ 1.06
COL5A2P05997 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
COL5A2P05997 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC21.66■■□□□ 1.06
COL5A2P05997 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms