Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGN1P05114 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 DUX4L26-201ENST00000489078 1255 ntBASIC15.24■□□□□ 0.03
HMGN1P05114 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGN1P05114 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.24■□□□□ 0.03
HMGN1P05114 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
HMGN1P05114 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HMGN1P05114 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HMGN1P05114 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
HMGN1P05114 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.24■□□□□ 0.03
HMGN1P05114 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HMGN1P05114 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HMGN1P05114 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.23■□□□□ 0.03
HMGN1P05114 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGN1P05114 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 KRT18P1-202ENST00000452408 1331 ntBASIC15.23■□□□□ 0.03
HMGN1P05114 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HMGN1P05114 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGN1P05114 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HMGN1P05114 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGN1P05114 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.23■□□□□ 0.03
HMGN1P05114 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.23■□□□□ 0.03
HMGN1P05114 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
HMGN1P05114 RCN1P2-201ENST00000398357 915 ntBASIC15.23■□□□□ 0.03
HMGN1P05114 AC096582.2-201ENST00000510860 516 ntBASIC15.23■□□□□ 0.03
HMGN1P05114 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.23■□□□□ 0.03
HMGN1P05114 TERC-201ENST00000602385 541 ntBASIC15.23■□□□□ 0.03
HMGN1P05114 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.23■□□□□ 0.03
HMGN1P05114 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGN1P05114 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HMGN1P05114 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGN1P05114 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
HMGN1P05114 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.23■□□□□ 0.03
HMGN1P05114 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HMGN1P05114 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HMGN1P05114 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 AC016734.2-201ENST00000624325 1377 ntBASIC15.23■□□□□ 0.03
HMGN1P05114 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGN1P05114 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGN1P05114 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.23■□□□□ 0.03
HMGN1P05114 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HMGN1P05114 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGN1P05114 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
HMGN1P05114 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGN1P05114 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGN1P05114 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HMGN1P05114 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.22■□□□□ 0.03
HMGN1P05114 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGN1P05114 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGN1P05114 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGN1P05114 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGN1P05114 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGN1P05114 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGN1P05114 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HMGN1P05114 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGN1P05114 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGN1P05114 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGN1P05114 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGN1P05114 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGN1P05114 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGN1P05114 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGN1P05114 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGN1P05114 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms