Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 AC246785.2-201ENST00000432512 513 ntBASIC15.14■□□□□ 0.01
HLA-DPB1P04440 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 AC109462.3-201ENST00000573934 613 ntBASIC15.14■□□□□ 0.01
HLA-DPB1P04440 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 Z69720.1-201ENST00000601483 472 ntBASIC15.14■□□□□ 0.01
HLA-DPB1P04440 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 AC125634.1-201ENST00000438758 1403 ntBASIC15.14■□□□□ 0.01
HLA-DPB1P04440 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 AL645728.1-201ENST00000366221 2101 ntBASIC15.14■□□□□ 0.01
HLA-DPB1P04440 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 GPR89P-201ENST00000407924 1495 ntBASIC15.14■□□□□ 0.01
HLA-DPB1P04440 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 ALOX12P2-203ENST00000570921 1945 ntBASIC15.13■□□□□ 0.01
HLA-DPB1P04440 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 KRT17P6-201ENST00000453795 1220 ntBASIC15.13■□□□□ 0.01
HLA-DPB1P04440 MINOS1P3-201ENST00000457048 203 ntBASIC15.13■□□□□ 0.01
HLA-DPB1P04440 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 AC074051.2-201ENST00000565115 352 ntBASIC15.13■□□□□ 0.01
HLA-DPB1P04440 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 AL138831.2-201ENST00000606564 490 ntBASIC15.13■□□□□ 0.01
HLA-DPB1P04440 AC019129.2-201ENST00000609837 1235 ntBASIC15.13■□□□□ 0.01
HLA-DPB1P04440 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 AC068418.2-201ENST00000577309 3703 ntBASIC15.13■□□□□ 0.01
HLA-DPB1P04440 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 ME2P1-201ENST00000426028 1970 ntBASIC15.13■□□□□ 0.01
HLA-DPB1P04440 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPB1P04440 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 AC007967.3-201ENST00000434308 558 ntBASIC15.12■□□□□ 0.01
HLA-DPB1P04440 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 HCG4P8-203ENST00000443049 980 ntBASIC15.12■□□□□ 0.01
HLA-DPB1P04440 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms