Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KRT6AP02538 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6AP02538 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT6AP02538 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KRT6AP02538 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 AC068418.2-201ENST00000577309 3703 ntBASIC16.3■□□□□ 0.2
KRT6AP02538 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT6AP02538 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KRT6AP02538 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
KRT6AP02538 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
KRT6AP02538 DOC2GP-204ENST00000639052 2548 ntBASIC16.29■□□□□ 0.2
KRT6AP02538 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
KRT6AP02538 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT6AP02538 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT6AP02538 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
KRT6AP02538 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT6AP02538 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
KRT6AP02538 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
KRT6AP02538 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT6AP02538 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
KRT6AP02538 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT6AP02538 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.29■□□□□ 0.2
KRT6AP02538 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.29■□□□□ 0.2
KRT6AP02538 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
KRT6AP02538 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.29■□□□□ 0.2
KRT6AP02538 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT6AP02538 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT6AP02538 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.29■□□□□ 0.2
KRT6AP02538 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 REXO1L6P-202ENST00000619970 1078 ntBASIC16.29■□□□□ 0.2
KRT6AP02538 AC004706.3-202ENST00000621574 984 ntBASIC16.29■□□□□ 0.2
KRT6AP02538 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT6AP02538 AF228730.7-201ENST00000641842 219 ntBASIC16.29■□□□□ 0.2
KRT6AP02538 AC006449.5-201ENST00000610658 2098 ntBASIC16.29■□□□□ 0.2
KRT6AP02538 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT6AP02538 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
KRT6AP02538 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6AP02538 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6AP02538 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.28■□□□□ 0.2
KRT6AP02538 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6AP02538 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
KRT6AP02538 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6AP02538 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6AP02538 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6AP02538 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
KRT6AP02538 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 PAWRP1-201ENST00000451083 565 ntBASIC16.28■□□□□ 0.2
KRT6AP02538 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
KRT6AP02538 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
KRT6AP02538 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6AP02538 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.28■□□□□ 0.2
KRT6AP02538 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.28■□□□□ 0.2
KRT6AP02538 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.28■□□□□ 0.2
KRT6AP02538 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6AP02538 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6AP02538 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
KRT6AP02538 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.28■□□□□ 0.2
KRT6AP02538 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
KRT6AP02538 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
KRT6AP02538 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
KRT6AP02538 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6AP02538 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
KRT6AP02538 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms