Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.74□□□□□ -0.21
SSSCA1O60232 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.74□□□□□ -0.21
SSSCA1O60232 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
SSSCA1O60232 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.74□□□□□ -0.21
SSSCA1O60232 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.74□□□□□ -0.21
SSSCA1O60232 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SSSCA1O60232 STK19B-204ENST00000512515 211 ntBASIC13.74□□□□□ -0.21
SSSCA1O60232 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.74□□□□□ -0.21
SSSCA1O60232 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.74□□□□□ -0.21
SSSCA1O60232 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.74□□□□□ -0.21
SSSCA1O60232 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.74□□□□□ -0.21
SSSCA1O60232 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.74□□□□□ -0.21
SSSCA1O60232 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.74□□□□□ -0.21
SSSCA1O60232 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 AC009336.1-201ENST00000608941 1553 ntBASIC13.74□□□□□ -0.21
SSSCA1O60232 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SSSCA1O60232 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.74□□□□□ -0.21
SSSCA1O60232 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
SSSCA1O60232 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SSSCA1O60232 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 AC126177.1-201ENST00000547829 2218 ntBASIC13.74□□□□□ -0.21
SSSCA1O60232 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SSSCA1O60232 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.73□□□□□ -0.21
SSSCA1O60232 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SSSCA1O60232 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SSSCA1O60232 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.73□□□□□ -0.21
SSSCA1O60232 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.73□□□□□ -0.21
SSSCA1O60232 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SSSCA1O60232 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.73□□□□□ -0.21
SSSCA1O60232 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.73□□□□□ -0.21
SSSCA1O60232 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
SSSCA1O60232 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.73□□□□□ -0.21
SSSCA1O60232 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.73□□□□□ -0.21
SSSCA1O60232 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
SSSCA1O60232 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.73□□□□□ -0.21
SSSCA1O60232 AC103564.2-201ENST00000432853 1299 ntBASIC13.73□□□□□ -0.21
SSSCA1O60232 AC122714.2-201ENST00000502787 707 ntBASIC13.73□□□□□ -0.21
SSSCA1O60232 AC008550.1-201ENST00000511500 884 ntBASIC13.73□□□□□ -0.21
SSSCA1O60232 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.73□□□□□ -0.21
SSSCA1O60232 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
SSSCA1O60232 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.73□□□□□ -0.21
SSSCA1O60232 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.73□□□□□ -0.21
SSSCA1O60232 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.73□□□□□ -0.21
SSSCA1O60232 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.73□□□□□ -0.21
SSSCA1O60232 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SSSCA1O60232 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSSCA1O60232 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.72□□□□□ -0.21
SSSCA1O60232 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms