Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.72■□□□□ 0.27
PHGDHO43175 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PHGDHO43175 KRT18P31-201ENST00000506277 1292 ntBASIC16.72■□□□□ 0.27
PHGDHO43175 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.72■□□□□ 0.27
PHGDHO43175 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.72■□□□□ 0.27
PHGDHO43175 AC013467.2-201ENST00000605472 835 ntBASIC16.72■□□□□ 0.27
PHGDHO43175 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 AL589182.2-201ENST00000619332 1049 ntBASIC16.72■□□□□ 0.27
PHGDHO43175 AL355877.3-201ENST00000622820 899 ntBASIC16.72■□□□□ 0.27
PHGDHO43175 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PHGDHO43175 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.72■□□□□ 0.27
PHGDHO43175 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.72■□□□□ 0.27
PHGDHO43175 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PHGDHO43175 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.72■□□□□ 0.27
PHGDHO43175 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.72■□□□□ 0.27
PHGDHO43175 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.72■□□□□ 0.27
PHGDHO43175 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PHGDHO43175 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.72■□□□□ 0.27
PHGDHO43175 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.72■□□□□ 0.27
PHGDHO43175 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PHGDHO43175 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.71■□□□□ 0.27
PHGDHO43175 ME2P1-201ENST00000426028 1970 ntBASIC16.71■□□□□ 0.27
PHGDHO43175 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.71■□□□□ 0.27
PHGDHO43175 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.71■□□□□ 0.27
PHGDHO43175 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.71■□□□□ 0.27
PHGDHO43175 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.71■□□□□ 0.27
PHGDHO43175 FGFR3P6-201ENST00000457012 610 ntBASIC16.71■□□□□ 0.27
PHGDHO43175 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.71■□□□□ 0.27
PHGDHO43175 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PHGDHO43175 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.71■□□□□ 0.27
PHGDHO43175 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.71■□□□□ 0.27
PHGDHO43175 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PHGDHO43175 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PHGDHO43175 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PHGDHO43175 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.71■□□□□ 0.27
PHGDHO43175 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.71■□□□□ 0.27
PHGDHO43175 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.71■□□□□ 0.27
PHGDHO43175 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.71■□□□□ 0.27
PHGDHO43175 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PHGDHO43175 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.71■□□□□ 0.27
PHGDHO43175 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.71■□□□□ 0.27
PHGDHO43175 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHGDHO43175 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PHGDHO43175 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.71■□□□□ 0.26
PHGDHO43175 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PHGDHO43175 AC132872.4-202ENST00000622924 2756 ntBASIC16.71■□□□□ 0.26
PHGDHO43175 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PHGDHO43175 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
PHGDHO43175 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
PHGDHO43175 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
PHGDHO43175 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.7■□□□□ 0.26
PHGDHO43175 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
PHGDHO43175 AL513523.2-202ENST00000427283 2040 ntBASIC16.7■□□□□ 0.26
PHGDHO43175 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.7■□□□□ 0.26
PHGDHO43175 AL671710.1-201ENST00000610245 2349 ntBASIC16.7■□□□□ 0.26
PHGDHO43175 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.7■□□□□ 0.26
PHGDHO43175 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PHGDHO43175 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PHGDHO43175 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PHGDHO43175 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.7■□□□□ 0.26
PHGDHO43175 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PHGDHO43175 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PHGDHO43175 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms