Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TSPAN4O14817 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TSPAN4O14817 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 GRK6P1-201ENST00000400595 1711 ntBASIC14.19□□□□□ -0.14
TSPAN4O14817 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TSPAN4O14817 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.19□□□□□ -0.14
TSPAN4O14817 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.19□□□□□ -0.14
TSPAN4O14817 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.19□□□□□ -0.14
TSPAN4O14817 AC007663.1-201ENST00000438948 1240 ntBASIC14.19□□□□□ -0.14
TSPAN4O14817 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.19□□□□□ -0.14
TSPAN4O14817 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.19□□□□□ -0.14
TSPAN4O14817 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.19□□□□□ -0.14
TSPAN4O14817 LINC01023-201ENST00000606054 436 ntBASIC14.19□□□□□ -0.14
TSPAN4O14817 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.19□□□□□ -0.14
TSPAN4O14817 AC097493.4-201ENST00000641197 219 ntBASIC14.19□□□□□ -0.14
TSPAN4O14817 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TSPAN4O14817 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TSPAN4O14817 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.19□□□□□ -0.14
TSPAN4O14817 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
TSPAN4O14817 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TSPAN4O14817 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
TSPAN4O14817 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.19□□□□□ -0.14
TSPAN4O14817 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.19□□□□□ -0.14
TSPAN4O14817 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSPAN4O14817 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.19□□□□□ -0.14
TSPAN4O14817 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TSPAN4O14817 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TSPAN4O14817 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.18□□□□□ -0.14
TSPAN4O14817 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.18□□□□□ -0.14
TSPAN4O14817 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
TSPAN4O14817 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TSPAN4O14817 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TSPAN4O14817 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TSPAN4O14817 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TSPAN4O14817 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
TSPAN4O14817 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.18□□□□□ -0.14
TSPAN4O14817 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TSPAN4O14817 AL512604.3-201ENST00000569583 964 ntBASIC14.18□□□□□ -0.14
TSPAN4O14817 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.18□□□□□ -0.14
TSPAN4O14817 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.18□□□□□ -0.14
TSPAN4O14817 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.18□□□□□ -0.14
TSPAN4O14817 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
TSPAN4O14817 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.18□□□□□ -0.14
TSPAN4O14817 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.18□□□□□ -0.14
TSPAN4O14817 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.18□□□□□ -0.14
TSPAN4O14817 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
TSPAN4O14817 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSPAN4O14817 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.18□□□□□ -0.14
TSPAN4O14817 AC092364.2-201ENST00000596710 2692 ntBASIC14.18□□□□□ -0.14
TSPAN4O14817 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
TSPAN4O14817 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSPAN4O14817 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSPAN4O14817 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.17□□□□□ -0.14
TSPAN4O14817 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSPAN4O14817 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TSPAN4O14817 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TSPAN4O14817 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TSPAN4O14817 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
TSPAN4O14817 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TSPAN4O14817 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TSPAN4O14817 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSPAN4O14817 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.17□□□□□ -0.14
TSPAN4O14817 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TSPAN4O14817 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TSPAN4O14817 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.17□□□□□ -0.14
TSPAN4O14817 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSPAN4O14817 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TSPAN4O14817 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.17□□□□□ -0.14
TSPAN4O14817 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms