Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.41■■□□□ 1.02
CHL1O00533 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHL1O00533 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CHL1O00533 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHL1O00533 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHL1O00533 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHL1O00533 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHL1O00533 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHL1O00533 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CHL1O00533 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHL1O00533 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHL1O00533 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHL1O00533 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHL1O00533 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHL1O00533 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CHL1O00533 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CHL1O00533 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC21.4■■□□□ 1.02
CHL1O00533 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.4■■□□□ 1.02
CHL1O00533 UBALD1-205ENST00000590891 2641 ntBASIC21.4■■□□□ 1.02
CHL1O00533 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHL1O00533 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.4■■□□□ 1.02
CHL1O00533 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHL1O00533 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.4■■□□□ 1.02
CHL1O00533 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.4■■□□□ 1.02
CHL1O00533 ALG1L8P-201ENST00000533887 760 ntBASIC21.4■■□□□ 1.02
CHL1O00533 AC004449.1-201ENST00000564240 433 ntBASIC21.4■■□□□ 1.02
CHL1O00533 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC21.4■■□□□ 1.02
CHL1O00533 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.4■■□□□ 1.02
CHL1O00533 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.4■■□□□ 1.02
CHL1O00533 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC21.4■■□□□ 1.02
CHL1O00533 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHL1O00533 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHL1O00533 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHL1O00533 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHL1O00533 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC21.4■■□□□ 1.02
CHL1O00533 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
CHL1O00533 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.4■■□□□ 1.02
CHL1O00533 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHL1O00533 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHL1O00533 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CHL1O00533 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHL1O00533 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.39■■□□□ 1.02
CHL1O00533 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHL1O00533 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.02
CHL1O00533 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CHL1O00533 AD000864.1-201ENST00000624076 2295 ntBASIC21.39■■□□□ 1.02
CHL1O00533 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHL1O00533 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHL1O00533 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CHL1O00533 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHL1O00533 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.39■■□□□ 1.01
CHL1O00533 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.39■■□□□ 1.01
CHL1O00533 AC093724.1-201ENST00000448659 1027 ntBASIC21.39■■□□□ 1.01
CHL1O00533 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.39■■□□□ 1.01
CHL1O00533 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.39■■□□□ 1.01
CHL1O00533 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.39■■□□□ 1.01
CHL1O00533 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.39■■□□□ 1.01
CHL1O00533 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHL1O00533 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
CHL1O00533 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHL1O00533 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.39■■□□□ 1.01
CHL1O00533 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHL1O00533 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHL1O00533 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC21.38■■□□□ 1.01
CHL1O00533 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHL1O00533 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHL1O00533 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHL1O00533 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CHL1O00533 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.38■■□□□ 1.01
CHL1O00533 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC21.38■■□□□ 1.01
CHL1O00533 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.38■■□□□ 1.01
CHL1O00533 AC069262.1-201ENST00000539058 672 ntBASIC21.38■■□□□ 1.01
CHL1O00533 AC025678.2-201ENST00000562061 970 ntBASIC21.38■■□□□ 1.01
CHL1O00533 QPRT-203ENST00000562473 579 ntTSL 3 BASIC21.38■■□□□ 1.01
CHL1O00533 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHL1O00533 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.38■■□□□ 1.01
CHL1O00533 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.38■■□□□ 1.01
CHL1O00533 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHL1O00533 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHL1O00533 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHL1O00533 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHL1O00533 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHL1O00533 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHL1O00533 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHL1O00533 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC21.37■■□□□ 1.01
CHL1O00533 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHL1O00533 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHL1O00533 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHL1O00533 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC21.37■■□□□ 1.01
CHL1O00533 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC21.37■■□□□ 1.01
CHL1O00533 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.37■■□□□ 1.01
CHL1O00533 CYMP-203ENST00000474680 1263 ntBASIC21.37■■□□□ 1.01
CHL1O00533 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.37■■□□□ 1.01
CHL1O00533 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
CHL1O00533 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.37■■□□□ 1.01
CHL1O00533 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.37■■□□□ 1.01
CHL1O00533 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC21.37■■□□□ 1.01
CHL1O00533 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
CHL1O00533 Z92544.3-201ENST00000624747 417 ntBASIC21.37■■□□□ 1.01
CHL1O00533 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms