Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC026691.1-201ENST00000602502 2017 ntBASIC14.82□□□□□ -0.04
NPIPB4C9JG80 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 IGLL3P-201ENST00000412472 434 ntBASIC14.82□□□□□ -0.04
NPIPB4C9JG80 HCG4B-203ENST00000450128 991 ntBASIC14.82□□□□□ -0.04
NPIPB4C9JG80 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 AC096734.2-201ENST00000562054 433 ntBASIC14.82□□□□□ -0.04
NPIPB4C9JG80 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 HMGA1P7-201ENST00000406908 502 ntBASIC14.81□□□□□ -0.04
NPIPB4C9JG80 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 CRYGEP-201ENST00000412192 528 ntBASIC14.81□□□□□ -0.04
NPIPB4C9JG80 RHOQP3-201ENST00000437982 621 ntBASIC14.81□□□□□ -0.04
NPIPB4C9JG80 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 RNA5SP415-201ENST00000517246 115 ntBASIC14.81□□□□□ -0.04
NPIPB4C9JG80 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 AC109635.5-201ENST00000533593 962 ntBASIC14.81□□□□□ -0.04
NPIPB4C9JG80 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 AL031055.1-201ENST00000606362 631 ntBASIC14.81□□□□□ -0.04
NPIPB4C9JG80 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 HLA-A-201ENST00000376802 1334 ntBASIC14.81□□□□□ -0.04
NPIPB4C9JG80 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB4C9JG80 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 AC145285.3-201ENST00000564603 959 ntBASIC14.8□□□□□ -0.04
NPIPB4C9JG80 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB4C9JG80 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms