Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 LINC00982-205ENST00000420957 435 ntBASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 LINC00265-3P-201ENST00000447588 903 ntBASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-7A0A0A0MS04 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 PCED1CP-201ENST00000419887 785 ntBASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 ABCD1P5-201ENST00000445663 754 ntBASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC074051.2-201ENST00000565115 352 ntBASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC092329.2-201ENST00000598402 547 ntBASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 KRT8P49-201ENST00000604166 1432 ntBASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-7A0A0A0MS04 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms