Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 AC087163.2-201ENST00000457299 853 ntBASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB11Q9Y5F2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHB11Q9Y5F2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHB11Q9Y5F2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHB11Q9Y5F2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB11Q9Y5F2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 AL021920.2-201ENST00000624828 1351 ntBASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 AC105020.1-201ENST00000435356 2205 ntBASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 MIR770-201ENST00000390219 98 ntBASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 AC074386.1-202ENST00000463561 864 ntBASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 AC023141.13-201ENST00000604991 943 ntBASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 AC010507.1-201ENST00000633895 436 ntBASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms