Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 KRT8P10-201ENST00000450021 1447 ntBASIC15.93■□□□□ 0.14
AP4S1Q9Y587 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 AP005117.1-202ENST00000581724 1908 ntBASIC15.92■□□□□ 0.14
AP4S1Q9Y587 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 AC122714.2-201ENST00000502787 707 ntBASIC15.92■□□□□ 0.14
AP4S1Q9Y587 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 AC013268.4-201ENST00000637413 2228 ntBASIC15.92■□□□□ 0.14
AP4S1Q9Y587 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4S1Q9Y587 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 HMGA1P5-201ENST00000412453 271 ntBASIC15.91■□□□□ 0.14
AP4S1Q9Y587 HLA-F-220ENST00000434407 884 ntBASIC15.91■□□□□ 0.14
AP4S1Q9Y587 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 MIR4651-201ENST00000582622 73 ntBASIC15.91■□□□□ 0.14
AP4S1Q9Y587 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 AP002414.2-201ENST00000591780 3365 ntBASIC15.91■□□□□ 0.14
AP4S1Q9Y587 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms