Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL031432.5-201ENST00000641059 760 ntBASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 OR2I1P-210ENST00000642037 4691 ntBASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 ALOX12P2-203ENST00000570921 1945 ntBASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 ME2P1-201ENST00000426028 1970 ntBASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 HLA-J-202ENST00000469281 1241 ntBASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 AC010947.1-201ENST00000623454 693 ntBASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 CYP2D8P-201ENST00000433633 1490 ntBASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
KCNIP3Q9Y2W7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 AC023824.1-201ENST00000562945 2975 ntBASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 AC007967.3-201ENST00000434308 558 ntBASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.1□□□□□ -0.15
KCNIP3Q9Y2W7 AL135999.2-201ENST00000622438 1686 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms