Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 AL589702.1-201ENST00000641229 1509 ntBASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 AC024267.1-201ENST00000582320 895 ntBASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 LINC02084-201ENST00000606069 1096 ntBASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 AC073592.8-201ENST00000624126 511 ntBASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 AL603756.1-201ENST00000606511 2163 ntBASIC19.15■□□□□ 0.66
SYNPO2Q9UMS6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.14■□□□□ 0.66
SYNPO2Q9UMS6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SYNPO2Q9UMS6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SYNPO2Q9UMS6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SYNPO2Q9UMS6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SYNPO2Q9UMS6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.14■□□□□ 0.66
SYNPO2Q9UMS6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 AC105020.1-201ENST00000435356 2205 ntBASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SYNPO2Q9UMS6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 INGX-202ENST00000489074 768 ntBASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 AC003101.2-201ENST00000612557 442 ntBASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 LINC01144-201ENST00000626198 1710 ntBASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms