Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.88■□□□□ 0.45
CISHQ9NSE2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CISHQ9NSE2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CISHQ9NSE2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CISHQ9NSE2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CISHQ9NSE2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.88■□□□□ 0.45
CISHQ9NSE2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CISHQ9NSE2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CISHQ9NSE2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.88■□□□□ 0.45
CISHQ9NSE2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CISHQ9NSE2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CISHQ9NSE2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 RNU1-129P-201ENST00000384064 167 ntBASIC17.87■□□□□ 0.45
CISHQ9NSE2 AC023274.1-201ENST00000418278 595 ntBASIC17.87■□□□□ 0.45
CISHQ9NSE2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.87■□□□□ 0.45
CISHQ9NSE2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 U1.21-201ENST00000580816 167 ntBASIC17.87■□□□□ 0.45
CISHQ9NSE2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.87■□□□□ 0.45
CISHQ9NSE2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.87■□□□□ 0.45
CISHQ9NSE2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CISHQ9NSE2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CISHQ9NSE2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CISHQ9NSE2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.87■□□□□ 0.45
CISHQ9NSE2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 AC099398.1-201ENST00000567919 2776 ntBASIC17.86■□□□□ 0.45
CISHQ9NSE2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CISHQ9NSE2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CISHQ9NSE2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CISHQ9NSE2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CISHQ9NSE2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CISHQ9NSE2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CISHQ9NSE2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CISHQ9NSE2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CISHQ9NSE2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CISHQ9NSE2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CISHQ9NSE2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CISHQ9NSE2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CISHQ9NSE2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CISHQ9NSE2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CISHQ9NSE2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CISHQ9NSE2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CISHQ9NSE2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CISHQ9NSE2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CISHQ9NSE2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CISHQ9NSE2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CISHQ9NSE2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms