Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 PAWRP1-201ENST00000451083 565 ntBASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 KRT18P31-201ENST00000506277 1292 ntBASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRTM1Q9HBL6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 HCG4P8-203ENST00000443049 980 ntBASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 FGFR3P6-201ENST00000457012 610 ntBASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 SART3-203ENST00000546611 1184 ntBASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 MTDHP4-201ENST00000600287 670 ntBASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 AC008608.2-201ENST00000606089 416 ntBASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 LINC02199-201ENST00000506655 2702 ntBASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LRTM1Q9HBL6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms