Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 LINC00895-201ENST00000629028 1637 ntBASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 TMPOP1-202ENST00000424642 1267 ntBASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 ALOX12P2-203ENST00000570921 1945 ntBASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 AC006538.1-201ENST00000567905 1585 ntBASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 AL020989.1-201ENST00000422979 469 ntBASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD4Q9H0A8 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 MTHFR-217ENST00000641820 1569 ntBASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.87□□□□□ -0.03
COMMD4Q9H0A8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms