Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 AC107918.4-201ENST00000641966 3141 ntBASIC13.65□□□□□ -0.22
NKX6-2Q9C056 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 AC011506.1-201ENST00000474329 610 ntBASIC13.65□□□□□ -0.22
NKX6-2Q9C056 AC026366.1-201ENST00000488803 879 ntBASIC13.65□□□□□ -0.22
NKX6-2Q9C056 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 AC104390.1-201ENST00000555663 520 ntBASIC13.65□□□□□ -0.22
NKX6-2Q9C056 AC098934.4-201ENST00000564127 592 ntBASIC13.65□□□□□ -0.22
NKX6-2Q9C056 RARRES2P10-201ENST00000564312 460 ntBASIC13.65□□□□□ -0.22
NKX6-2Q9C056 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
NKX6-2Q9C056 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 AP005117.1-202ENST00000581724 1908 ntBASIC13.64□□□□□ -0.23
NKX6-2Q9C056 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.64□□□□□ -0.23
NKX6-2Q9C056 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 PTENP1-202ENST00000532280 3996 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms