Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NEK1Q96PY6 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.86■□□□□ 0.77
NEK1Q96PY6 CXCL1P1-201ENST00000502804 216 ntBASIC19.86■□□□□ 0.77
NEK1Q96PY6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.86■□□□□ 0.77
NEK1Q96PY6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.86■□□□□ 0.77
NEK1Q96PY6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NEK1Q96PY6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.86■□□□□ 0.77
NEK1Q96PY6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.86■□□□□ 0.77
NEK1Q96PY6 AP001350.2-201ENST00000625104 1094 ntBASIC19.86■□□□□ 0.77
NEK1Q96PY6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK1Q96PY6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK1Q96PY6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NEK1Q96PY6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.86■□□□□ 0.77
NEK1Q96PY6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.86■□□□□ 0.77
NEK1Q96PY6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
NEK1Q96PY6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK1Q96PY6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.86■□□□□ 0.77
NEK1Q96PY6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
NEK1Q96PY6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK1Q96PY6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK1Q96PY6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK1Q96PY6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
NEK1Q96PY6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.86■□□□□ 0.77
NEK1Q96PY6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEK1Q96PY6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEK1Q96PY6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.85■□□□□ 0.77
NEK1Q96PY6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NEK1Q96PY6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.85■□□□□ 0.77
NEK1Q96PY6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NEK1Q96PY6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.85■□□□□ 0.77
NEK1Q96PY6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NEK1Q96PY6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEK1Q96PY6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NEK1Q96PY6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
NEK1Q96PY6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.85■□□□□ 0.77
NEK1Q96PY6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.85■□□□□ 0.77
NEK1Q96PY6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.85■□□□□ 0.77
NEK1Q96PY6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.85■□□□□ 0.77
NEK1Q96PY6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.85■□□□□ 0.77
NEK1Q96PY6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.85■□□□□ 0.77
NEK1Q96PY6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEK1Q96PY6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEK1Q96PY6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.85■□□□□ 0.77
NEK1Q96PY6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEK1Q96PY6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
NEK1Q96PY6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NEK1Q96PY6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NEK1Q96PY6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 CRYGEP-201ENST00000412192 528 ntBASIC19.84■□□□□ 0.77
NEK1Q96PY6 IGLL3P-201ENST00000412472 434 ntBASIC19.84■□□□□ 0.77
NEK1Q96PY6 AC079776.4-201ENST00000511039 504 ntBASIC19.84■□□□□ 0.77
NEK1Q96PY6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 Z83851.2-201ENST00000609564 659 ntBASIC19.84■□□□□ 0.77
NEK1Q96PY6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.84■□□□□ 0.77
NEK1Q96PY6 AC006538.3-201ENST00000612495 578 ntBASIC19.84■□□□□ 0.77
NEK1Q96PY6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.84■□□□□ 0.77
NEK1Q96PY6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
NEK1Q96PY6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.84■□□□□ 0.77
NEK1Q96PY6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.84■□□□□ 0.77
NEK1Q96PY6 AL662844.4-201ENST00000606367 2838 ntBASIC19.84■□□□□ 0.77
NEK1Q96PY6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK1Q96PY6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.83■□□□□ 0.77
NEK1Q96PY6 AL031731.1-201ENST00000642131 2094 ntBASIC19.83■□□□□ 0.77
NEK1Q96PY6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEK1Q96PY6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NEK1Q96PY6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEK1Q96PY6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
NEK1Q96PY6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.83■□□□□ 0.77
NEK1Q96PY6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEK1Q96PY6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEK1Q96PY6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NEK1Q96PY6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEK1Q96PY6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
NEK1Q96PY6 AC012569.1-201ENST00000591191 1524 ntBASIC19.83■□□□□ 0.77
NEK1Q96PY6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.83■□□□□ 0.77
NEK1Q96PY6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEK1Q96PY6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEK1Q96PY6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEK1Q96PY6 HCG4B-203ENST00000450128 991 ntBASIC19.83■□□□□ 0.77
NEK1Q96PY6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NEK1Q96PY6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.83■□□□□ 0.77
NEK1Q96PY6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEK1Q96PY6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.83■□□□□ 0.77
NEK1Q96PY6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms