Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC107918.4-202ENST00000641623 219 ntBASIC15.92■□□□□ 0.14
COL21A1Q96P44 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.92■□□□□ 0.14
COL21A1Q96P44 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.92■□□□□ 0.14
COL21A1Q96P44 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.92■□□□□ 0.14
COL21A1Q96P44 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.92■□□□□ 0.14
COL21A1Q96P44 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 AL662844.1-201ENST00000546340 181 ntBASIC15.91■□□□□ 0.14
COL21A1Q96P44 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 AL773604.1-201ENST00000617417 272 ntBASIC15.91■□□□□ 0.14
COL21A1Q96P44 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.91■□□□□ 0.14
COL21A1Q96P44 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL21A1Q96P44 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.91■□□□□ 0.14
COL21A1Q96P44 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 AC006449.5-201ENST00000610658 2098 ntBASIC15.9■□□□□ 0.14
COL21A1Q96P44 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 AC006557.2-201ENST00000592985 1240 ntBASIC15.9■□□□□ 0.14
COL21A1Q96P44 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms