Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTP4Q96DX8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTP4Q96DX8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.1■□□□□ 0.33
RTP4Q96DX8 GPAA1P2-202ENST00000606848 1787 ntBASIC17.1■□□□□ 0.33
RTP4Q96DX8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.1■□□□□ 0.33
RTP4Q96DX8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RTP4Q96DX8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RTP4Q96DX8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTP4Q96DX8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTP4Q96DX8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.1■□□□□ 0.33
RTP4Q96DX8 MIR574-201ENST00000385209 96 ntBASIC17.1■□□□□ 0.33
RTP4Q96DX8 SLC25A1P1-201ENST00000528351 927 ntBASIC17.1■□□□□ 0.33
RTP4Q96DX8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.1■□□□□ 0.33
RTP4Q96DX8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.1■□□□□ 0.33
RTP4Q96DX8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.1■□□□□ 0.33
RTP4Q96DX8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RTP4Q96DX8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTP4Q96DX8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTP4Q96DX8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.1■□□□□ 0.33
RTP4Q96DX8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RTP4Q96DX8 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.1■□□□□ 0.33
RTP4Q96DX8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
RTP4Q96DX8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTP4Q96DX8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.1■□□□□ 0.33
RTP4Q96DX8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.1■□□□□ 0.33
RTP4Q96DX8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.1■□□□□ 0.33
RTP4Q96DX8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTP4Q96DX8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTP4Q96DX8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.09■□□□□ 0.33
RTP4Q96DX8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTP4Q96DX8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RTP4Q96DX8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTP4Q96DX8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.09■□□□□ 0.33
RTP4Q96DX8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.09■□□□□ 0.33
RTP4Q96DX8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.09■□□□□ 0.33
RTP4Q96DX8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
RTP4Q96DX8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.09■□□□□ 0.33
RTP4Q96DX8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RTP4Q96DX8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTP4Q96DX8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTP4Q96DX8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.09■□□□□ 0.33
RTP4Q96DX8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
RTP4Q96DX8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTP4Q96DX8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.09■□□□□ 0.33
RTP4Q96DX8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RTP4Q96DX8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.09■□□□□ 0.33
RTP4Q96DX8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.09■□□□□ 0.33
RTP4Q96DX8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTP4Q96DX8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTP4Q96DX8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTP4Q96DX8 PCDHA1-201ENST00000378133 2726 ntBASIC17.09■□□□□ 0.33
RTP4Q96DX8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RTP4Q96DX8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTP4Q96DX8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RTP4Q96DX8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.08■□□□□ 0.33
RTP4Q96DX8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RTP4Q96DX8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RTP4Q96DX8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.08■□□□□ 0.33
RTP4Q96DX8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RTP4Q96DX8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RTP4Q96DX8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RTP4Q96DX8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RTP4Q96DX8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RTP4Q96DX8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RTP4Q96DX8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RTP4Q96DX8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTP4Q96DX8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RTP4Q96DX8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTP4Q96DX8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTP4Q96DX8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.08■□□□□ 0.32
RTP4Q96DX8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTP4Q96DX8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.08■□□□□ 0.32
RTP4Q96DX8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTP4Q96DX8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.08■□□□□ 0.32
RTP4Q96DX8 HNRNPDP1-201ENST00000439535 754 ntBASIC17.08■□□□□ 0.32
RTP4Q96DX8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.08■□□□□ 0.32
RTP4Q96DX8 AC105339.3-201ENST00000560043 636 ntBASIC17.08■□□□□ 0.32
RTP4Q96DX8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.08■□□□□ 0.32
RTP4Q96DX8 OR7E47P-204ENST00000575924 449 ntBASIC17.08■□□□□ 0.32
RTP4Q96DX8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.08■□□□□ 0.32
RTP4Q96DX8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.08■□□□□ 0.32
RTP4Q96DX8 AL356488.2-201ENST00000602755 427 ntBASIC17.08■□□□□ 0.32
RTP4Q96DX8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.08■□□□□ 0.32
RTP4Q96DX8 AP001350.2-201ENST00000625104 1094 ntBASIC17.08■□□□□ 0.32
RTP4Q96DX8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTP4Q96DX8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTP4Q96DX8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTP4Q96DX8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RTP4Q96DX8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
RTP4Q96DX8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.08■□□□□ 0.32
RTP4Q96DX8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.08■□□□□ 0.32
RTP4Q96DX8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RTP4Q96DX8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RTP4Q96DX8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTP4Q96DX8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RTP4Q96DX8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTP4Q96DX8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.07■□□□□ 0.32
RTP4Q96DX8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.07■□□□□ 0.32
RTP4Q96DX8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.07■□□□□ 0.32
RTP4Q96DX8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms