Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RNF34Q969K3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF34Q969K3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RNF34Q969K3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF34Q969K3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF34Q969K3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF34Q969K3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF34Q969K3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF34Q969K3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF34Q969K3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF34Q969K3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF34Q969K3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF34Q969K3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF34Q969K3 PMS2P7-201ENST00000506558 1336 ntBASIC17.57■□□□□ 0.4
RNF34Q969K3 BCAR1-209ENST00000546196 1340 ntBASIC17.57■□□□□ 0.4
RNF34Q969K3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RNF34Q969K3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF34Q969K3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF34Q969K3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF34Q969K3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF34Q969K3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF34Q969K3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF34Q969K3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF34Q969K3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF34Q969K3 AC005412.3-201ENST00000580309 715 ntBASIC17.57■□□□□ 0.4
RNF34Q969K3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RNF34Q969K3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF34Q969K3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF34Q969K3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF34Q969K3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF34Q969K3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF34Q969K3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF34Q969K3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF34Q969K3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF34Q969K3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF34Q969K3 AL353732.1-201ENST00000569618 1459 ntBASIC17.56■□□□□ 0.4
RNF34Q969K3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF34Q969K3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RNF34Q969K3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF34Q969K3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF34Q969K3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF34Q969K3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF34Q969K3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
RNF34Q969K3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF34Q969K3 AC023141.13-201ENST00000604991 943 ntBASIC17.56■□□□□ 0.4
RNF34Q969K3 ACTL9-202ENST00000612068 1252 ntBASIC17.56■□□□□ 0.4
RNF34Q969K3 AC004877.2-201ENST00000623941 599 ntBASIC17.56■□□□□ 0.4
RNF34Q969K3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF34Q969K3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF34Q969K3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
RNF34Q969K3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF34Q969K3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RNF34Q969K3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF34Q969K3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RNF34Q969K3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF34Q969K3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF34Q969K3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF34Q969K3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF34Q969K3 AC022211.2-201ENST00000585075 2527 ntBASIC17.55■□□□□ 0.4
RNF34Q969K3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF34Q969K3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF34Q969K3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF34Q969K3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF34Q969K3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RNF34Q969K3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
RNF34Q969K3 AC023274.1-201ENST00000418278 595 ntBASIC17.55■□□□□ 0.4
RNF34Q969K3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF34Q969K3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.55■□□□□ 0.4
RNF34Q969K3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF34Q969K3 AP002490.2-201ENST00000524791 560 ntBASIC17.55■□□□□ 0.4
RNF34Q969K3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF34Q969K3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF34Q969K3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF34Q969K3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF34Q969K3 AP001350.2-201ENST00000625104 1094 ntBASIC17.55■□□□□ 0.4
RNF34Q969K3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF34Q969K3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF34Q969K3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF34Q969K3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RNF34Q969K3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF34Q969K3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF34Q969K3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF34Q969K3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF34Q969K3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms