Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 AL121772.3-201ENST00000610840 674 ntBASIC15.13■□□□□ 0.01
PTP4A1Q93096 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 AL139011.1-202ENST00000642063 584 ntBASIC15.13■□□□□ 0.01
PTP4A1Q93096 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 AL365203.3-201ENST00000609742 2057 ntBASIC15.13■□□□□ 0.01
PTP4A1Q93096 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 AC243591.1-201ENST00000452967 1364 ntBASIC15.12■□□□□ 0.01
PTP4A1Q93096 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 PRYP5-201ENST00000451909 266 ntBASIC15.12■□□□□ 0.01
PTP4A1Q93096 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 AL591684.3-201ENST00000605187 298 ntBASIC15.12■□□□□ 0.01
PTP4A1Q93096 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 PAUPAR-201ENST00000630360 2965 ntBASIC15.12■□□□□ 0.01
PTP4A1Q93096 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 AC023824.1-201ENST00000562945 2975 ntBASIC15.12■□□□□ 0.01
PTP4A1Q93096 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTP4A1Q93096 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.12■□□□□ 0.01
PTP4A1Q93096 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms