Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.55■□□□□ 0.08
CT55Q8WUE5 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CT55Q8WUE5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CT55Q8WUE5 AC013467.2-201ENST00000605472 835 ntBASIC15.55■□□□□ 0.08
CT55Q8WUE5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CT55Q8WUE5 AL590560.3-201ENST00000623350 461 ntBASIC15.55■□□□□ 0.08
CT55Q8WUE5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CT55Q8WUE5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.55■□□□□ 0.08
CT55Q8WUE5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CT55Q8WUE5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CT55Q8WUE5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CT55Q8WUE5 AC067852.2-201ENST00000590513 2313 ntBASIC15.55■□□□□ 0.08
CT55Q8WUE5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CT55Q8WUE5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CT55Q8WUE5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CT55Q8WUE5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CT55Q8WUE5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CT55Q8WUE5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CT55Q8WUE5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CT55Q8WUE5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CT55Q8WUE5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.54■□□□□ 0.08
CT55Q8WUE5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.54■□□□□ 0.08
CT55Q8WUE5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.54■□□□□ 0.08
CT55Q8WUE5 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.54■□□□□ 0.08
CT55Q8WUE5 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.54■□□□□ 0.08
CT55Q8WUE5 AC005034.1-201ENST00000426657 489 ntBASIC15.54■□□□□ 0.08
CT55Q8WUE5 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.54■□□□□ 0.08
CT55Q8WUE5 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.54■□□□□ 0.08
CT55Q8WUE5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.54■□□□□ 0.08
CT55Q8WUE5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.54■□□□□ 0.08
CT55Q8WUE5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.54■□□□□ 0.08
CT55Q8WUE5 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.54■□□□□ 0.08
CT55Q8WUE5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.54■□□□□ 0.08
CT55Q8WUE5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.54■□□□□ 0.08
CT55Q8WUE5 AL138828.2-201ENST00000615812 383 ntBASIC15.54■□□□□ 0.08
CT55Q8WUE5 AL035252.4-201ENST00000624174 288 ntBASIC15.54■□□□□ 0.08
CT55Q8WUE5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 AC073439.1-201ENST00000624121 1774 ntBASIC15.54■□□□□ 0.08
CT55Q8WUE5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CT55Q8WUE5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.53■□□□□ 0.08
CT55Q8WUE5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.53■□□□□ 0.08
CT55Q8WUE5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.53■□□□□ 0.08
CT55Q8WUE5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.53■□□□□ 0.08
CT55Q8WUE5 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 MRPS18AP1-201ENST00000414458 589 ntBASIC15.53■□□□□ 0.08
CT55Q8WUE5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.53■□□□□ 0.08
CT55Q8WUE5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.53■□□□□ 0.08
CT55Q8WUE5 TSSK5P-201ENST00000423978 907 ntBASIC15.53■□□□□ 0.08
CT55Q8WUE5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.53■□□□□ 0.08
CT55Q8WUE5 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.53■□□□□ 0.08
CT55Q8WUE5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.53■□□□□ 0.08
CT55Q8WUE5 SERBP1P5-201ENST00000510079 1181 ntBASIC15.53■□□□□ 0.08
CT55Q8WUE5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.53■□□□□ 0.08
CT55Q8WUE5 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
CT55Q8WUE5 AC012645.4-201ENST00000610691 1061 ntBASIC15.53■□□□□ 0.08
CT55Q8WUE5 SPTSSB-204ENST00000617024 1292 ntBASIC15.53■□□□□ 0.08
CT55Q8WUE5 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CT55Q8WUE5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.53■□□□□ 0.08
CT55Q8WUE5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 AC092068.3-201ENST00000587894 2016 ntBASIC15.53■□□□□ 0.08
CT55Q8WUE5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CT55Q8WUE5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.53■□□□□ 0.08
CT55Q8WUE5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CT55Q8WUE5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CT55Q8WUE5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CT55Q8WUE5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CT55Q8WUE5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms