Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 PTCHD3P3-201ENST00000403073 906 ntBASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 ELK2BP-201ENST00000415014 1224 ntBASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 AC063926.3-201ENST00000624734 5658 ntBASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 LINC00895-201ENST00000629028 1637 ntBASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP1Q8TDR0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 AC107918.4-202ENST00000641623 219 ntBASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 AF228730.7-201ENST00000641842 219 ntBASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAF3IP1Q8TDR0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAF3IP1Q8TDR0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAF3IP1Q8TDR0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
TRAF3IP1Q8TDR0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TRAF3IP1Q8TDR0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.52■□□□□ 0.39
TRAF3IP1Q8TDR0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.52■□□□□ 0.39
TRAF3IP1Q8TDR0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.52■□□□□ 0.39
TRAF3IP1Q8TDR0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
TRAF3IP1Q8TDR0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAF3IP1Q8TDR0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAF3IP1Q8TDR0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TRAF3IP1Q8TDR0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAF3IP1Q8TDR0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.52■□□□□ 0.39
TRAF3IP1Q8TDR0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAF3IP1Q8TDR0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.52■□□□□ 0.39
TRAF3IP1Q8TDR0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 PCDHB19P-201ENST00000570871 2371 ntBASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms