Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 TFAMP1-201ENST00000412727 736 ntBASIC23.31■■□□□ 1.32
TMC1Q8TDI8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 AC093520.2-201ENST00000561830 333 ntBASIC23.31■■□□□ 1.32
TMC1Q8TDI8 AC004449.1-201ENST00000564240 433 ntBASIC23.31■■□□□ 1.32
TMC1Q8TDI8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC23.31■■□□□ 1.32
TMC1Q8TDI8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 NKILA-202ENST00000614771 2598 ntBASIC23.31■■□□□ 1.32
TMC1Q8TDI8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMC1Q8TDI8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 CYMP-203ENST00000474680 1263 ntBASIC23.3■■□□□ 1.32
TMC1Q8TDI8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 AL009183.1-201ENST00000603760 355 ntBASIC23.3■■□□□ 1.32
TMC1Q8TDI8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC23.3■■□□□ 1.32
TMC1Q8TDI8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 AC011676.5-201ENST00000624864 2660 ntBASIC23.29■■□□□ 1.32
TMC1Q8TDI8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 AC023141.5-201ENST00000458585 616 ntBASIC23.29■■□□□ 1.32
TMC1Q8TDI8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 AC079140.1-201ENST00000508039 487 ntBASIC23.29■■□□□ 1.32
TMC1Q8TDI8 FAM86C2P-203ENST00000528684 1004 ntBASIC23.29■■□□□ 1.32
TMC1Q8TDI8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 AL135744.1-201ENST00000565098 629 ntBASIC23.29■■□□□ 1.32
TMC1Q8TDI8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMC1Q8TDI8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms