Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 AC006449.5-201ENST00000610658 2098 ntBASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 AC021087.4-201ENST00000563761 564 ntBASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 AC025062.2-201ENST00000605477 670 ntBASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 LINC00895-201ENST00000629028 1637 ntBASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LINC00346Q8IVM7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 ELK2BP-201ENST00000415014 1224 ntBASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 AC004706.3-202ENST00000621574 984 ntBASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 PI4KAP1-204ENST00000612579 1703 ntBASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00346Q8IVM7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms