Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 AC104640.1-201ENST00000562617 2109 ntBASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 KRT18P57-201ENST00000443599 1254 ntBASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 AP005901.3-202ENST00000581653 237 ntBASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 TP73-AS1-210ENST00000637775 1455 ntBASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 AC004817.3-201ENST00000602957 2129 ntBASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 AL671277.2-201ENST00000458060 996 ntBASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 KRT8P26-201ENST00000534154 1276 ntBASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM1Q86UE6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms