Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 KRT18P67-201ENST00000432816 1264 ntBASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 HNRNPDP1-201ENST00000439535 754 ntBASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 AC136632.2-201ENST00000512891 861 ntBASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 GGTLC5P-201ENST00000617623 998 ntBASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
HIST2H3AQ71DI3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 AC006538.1-201ENST00000567905 1585 ntBASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 AC091167.2-201ENST00000579581 588 ntBASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 AC008667.4-201ENST00000607370 168 ntBASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST2H3AQ71DI3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST2H3AQ71DI3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST2H3AQ71DI3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST2H3AQ71DI3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.77□□□□□ -0.04
HIST2H3AQ71DI3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HIST2H3AQ71DI3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST2H3AQ71DI3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST2H3AQ71DI3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST2H3AQ71DI3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.77□□□□□ -0.04
HIST2H3AQ71DI3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.77□□□□□ -0.04
HIST2H3AQ71DI3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST2H3AQ71DI3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST2H3AQ71DI3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
HIST2H3AQ71DI3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HIST2H3AQ71DI3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.77□□□□□ -0.05
HIST2H3AQ71DI3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIST2H3AQ71DI3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HIST2H3AQ71DI3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.77□□□□□ -0.05
HIST2H3AQ71DI3 FAAHP1-202ENST00000446499 1238 ntBASIC14.77□□□□□ -0.05
HIST2H3AQ71DI3 AF186996.4-201ENST00000467186 377 ntBASIC14.77□□□□□ -0.05
HIST2H3AQ71DI3 AC107918.2-201ENST00000530817 355 ntBASIC14.77□□□□□ -0.05
HIST2H3AQ71DI3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.77□□□□□ -0.05
HIST2H3AQ71DI3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.77□□□□□ -0.05
HIST2H3AQ71DI3 AC105339.3-201ENST00000560043 636 ntBASIC14.77□□□□□ -0.05
HIST2H3AQ71DI3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
HIST2H3AQ71DI3 RN7SL510P-201ENST00000581311 263 ntBASIC14.77□□□□□ -0.05
HIST2H3AQ71DI3 MPDU1-223ENST00000582151 728 ntBASIC14.77□□□□□ -0.05
HIST2H3AQ71DI3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms