Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 AF186996.4-201ENST00000467186 377 ntBASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 AC136632.2-201ENST00000512891 861 ntBASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 AL049840.3-201ENST00000602669 611 ntBASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 LINC00895-201ENST00000629028 1637 ntBASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 IGHV3-65-201ENST00000523210 341 ntBASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 SLC25A6P4-201ENST00000586535 553 ntBASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 AL356488.2-201ENST00000602755 427 ntBASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 PI4KAP1-204ENST00000612579 1703 ntBASIC15.12■□□□□ 0.01
NHLRC1Q6VVB1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 TOP3BP1-201ENST00000420768 1380 ntBASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 AL021920.2-201ENST00000624828 1351 ntBASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 AC132872.4-202ENST00000622924 2756 ntBASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 AL031284.1-201ENST00000419297 478 ntBASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 OR7E47P-204ENST00000575924 449 ntBASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 MIR4492-201ENST00000581627 80 ntBASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 AC013467.2-201ENST00000605472 835 ntBASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 MIR7706-201ENST00000613747 67 ntBASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms