Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC27A1Q6PCB7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
SLC27A1Q6PCB7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 AC105233.2-201ENST00000523697 349 ntBASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 AF228730.5-201ENST00000530288 346 ntBASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 AC106820.2-201ENST00000563775 3264 ntBASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A1Q6PCB7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 SPDYE14P-201ENST00000442619 822 ntBASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 CNN2P2-201ENST00000443536 909 ntBASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 CNN2P3-201ENST00000450201 906 ntBASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 AC067863.1-201ENST00000494933 530 ntBASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 AC026150.2-201ENST00000564693 1156 ntBASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 AC073389.1-201ENST00000595595 795 ntBASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 AC093512.1-201ENST00000617969 520 ntBASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 AL136317.3-201ENST00000618497 906 ntBASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A1Q6PCB7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 LETM1P2-201ENST00000597330 2178 ntBASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 PRYP6-201ENST00000514804 343 ntBASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 ALG1L8P-201ENST00000533887 760 ntBASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 AC069262.1-201ENST00000539058 672 ntBASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A1Q6PCB7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms