Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 U62317.3-201ENST00000608319 855 ntBASIC14.36□□□□□ -0.11
LRRK2Q5S007 AL391069.4-201ENST00000609583 481 ntBASIC14.36□□□□□ -0.11
LRRK2Q5S007 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.36□□□□□ -0.11
LRRK2Q5S007 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 Z93015.1-201ENST00000451718 390 ntBASIC14.36□□□□□ -0.11
LRRK2Q5S007 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 SCARNA20.5-201ENST00000516991 142 ntBASIC14.36□□□□□ -0.11
LRRK2Q5S007 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 AL162726.2-201ENST00000438986 1017 ntBASIC14.35□□□□□ -0.11
LRRK2Q5S007 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 CHMP4BP1-201ENST00000556017 588 ntBASIC14.35□□□□□ -0.11
LRRK2Q5S007 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 RARRES2P5-201ENST00000564013 466 ntBASIC14.35□□□□□ -0.11
LRRK2Q5S007 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 RN7SL560P-201ENST00000577943 264 ntBASIC14.35□□□□□ -0.11
LRRK2Q5S007 AL139327.4-201ENST00000612362 153 ntBASIC14.35□□□□□ -0.11
LRRK2Q5S007 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRK2Q5S007 AC007969.1-201ENST00000433675 447 ntBASIC14.35□□□□□ -0.11
LRRK2Q5S007 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRK2Q5S007 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LRRK2Q5S007 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRK2Q5S007 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 AL662890.1-201ENST00000396818 632 ntBASIC14.34□□□□□ -0.11
LRRK2Q5S007 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
LRRK2Q5S007 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 CU634019.7-201ENST00000624153 1185 ntBASIC14.34□□□□□ -0.11
LRRK2Q5S007 FP236241.2-201ENST00000624906 1185 ntBASIC14.34□□□□□ -0.11
LRRK2Q5S007 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LRRK2Q5S007 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
LRRK2Q5S007 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LRRK2Q5S007 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms