Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.25□□□□□ -0.13
SSBP1Q04837 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.25□□□□□ -0.13
SSBP1Q04837 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.25□□□□□ -0.13
SSBP1Q04837 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.25□□□□□ -0.13
SSBP1Q04837 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.25□□□□□ -0.13
SSBP1Q04837 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SSBP1Q04837 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.25□□□□□ -0.13
SSBP1Q04837 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SSBP1Q04837 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SSBP1Q04837 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SSBP1Q04837 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
SSBP1Q04837 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.24□□□□□ -0.13
SSBP1Q04837 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 AC144831.1-201ENST00000573312 2656 ntBASIC14.24□□□□□ -0.13
SSBP1Q04837 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
SSBP1Q04837 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SSBP1Q04837 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SSBP1Q04837 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.24□□□□□ -0.13
SSBP1Q04837 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.24□□□□□ -0.13
SSBP1Q04837 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.24□□□□□ -0.13
SSBP1Q04837 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.24□□□□□ -0.13
SSBP1Q04837 AC140113.3-201ENST00000605663 199 ntBASIC14.24□□□□□ -0.13
SSBP1Q04837 AL353801.3-201ENST00000609898 542 ntBASIC14.24□□□□□ -0.13
SSBP1Q04837 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.24□□□□□ -0.13
SSBP1Q04837 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.24□□□□□ -0.13
SSBP1Q04837 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.24□□□□□ -0.13
SSBP1Q04837 AC112504.1-201ENST00000623415 1841 ntBASIC14.24□□□□□ -0.13
SSBP1Q04837 AC132938.5-201ENST00000624980 1813 ntBASIC14.24□□□□□ -0.13
SSBP1Q04837 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SSBP1Q04837 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP1Q04837 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.24□□□□□ -0.13
SSBP1Q04837 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.24□□□□□ -0.13
SSBP1Q04837 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.23□□□□□ -0.13
SSBP1Q04837 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.23□□□□□ -0.13
SSBP1Q04837 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SSBP1Q04837 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.23□□□□□ -0.13
SSBP1Q04837 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 KRT17P2-201ENST00000300992 1314 ntBASIC14.23□□□□□ -0.13
SSBP1Q04837 AC073347.1-201ENST00000421633 2643 ntBASIC14.23□□□□□ -0.13
SSBP1Q04837 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SSBP1Q04837 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SSBP1Q04837 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
SSBP1Q04837 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.23□□□□□ -0.13
SSBP1Q04837 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SSBP1Q04837 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.23□□□□□ -0.13
SSBP1Q04837 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.23□□□□□ -0.13
SSBP1Q04837 MIR718-201ENST00000390190 70 ntBASIC14.23□□□□□ -0.13
SSBP1Q04837 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SSBP1Q04837 GCSHP5-201ENST00000443090 522 ntBASIC14.23□□□□□ -0.13
SSBP1Q04837 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SSBP1Q04837 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 AL138966.2-201ENST00000621997 464 ntBASIC14.23□□□□□ -0.13
SSBP1Q04837 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
SSBP1Q04837 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 CDC14C-201ENST00000428251 1719 ntBASIC14.23□□□□□ -0.13
SSBP1Q04837 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.23□□□□□ -0.13
SSBP1Q04837 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.23□□□□□ -0.13
SSBP1Q04837 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 LINC02447-202ENST00000501888 2146 ntBASIC14.23□□□□□ -0.13
SSBP1Q04837 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms