Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL20P78556 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL20P78556 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL20P78556 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL20P78556 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CCL20P78556 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL20P78556 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL20P78556 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL20P78556 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL20P78556 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL20P78556 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL20P78556 LINC02447-202ENST00000501888 2146 ntBASIC13.25□□□□□ -0.29
CCL20P78556 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCL20P78556 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CCL20P78556 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL20P78556 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CCL20P78556 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCL20P78556 AC092338.2-201ENST00000568827 1415 ntBASIC13.25□□□□□ -0.29
CCL20P78556 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCL20P78556 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL20P78556 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL20P78556 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL20P78556 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL20P78556 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL20P78556 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CCL20P78556 AC024563.2-201ENST00000603282 481 ntBASIC13.25□□□□□ -0.29
CCL20P78556 CD177P1-201ENST00000606252 935 ntBASIC13.25□□□□□ -0.29
CCL20P78556 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL20P78556 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL20P78556 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 AC136621.1-201ENST00000624017 2304 ntBASIC13.25□□□□□ -0.29
CCL20P78556 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL20P78556 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCL20P78556 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CCL20P78556 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CCL20P78556 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCL20P78556 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL20P78556 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL20P78556 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CCL20P78556 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.24□□□□□ -0.29
CCL20P78556 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CCL20P78556 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL20P78556 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL20P78556 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.24□□□□□ -0.29
CCL20P78556 BX088651.1-201ENST00000540551 451 ntBASIC13.24□□□□□ -0.29
CCL20P78556 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL20P78556 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
CCL20P78556 AC092865.7-201ENST00000641832 219 ntBASIC13.24□□□□□ -0.29
CCL20P78556 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CCL20P78556 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL20P78556 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 AL135999.2-201ENST00000622438 1686 ntBASIC13.24□□□□□ -0.29
CCL20P78556 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL20P78556 LINC00895-201ENST00000629028 1637 ntBASIC13.24□□□□□ -0.29
CCL20P78556 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
CCL20P78556 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCL20P78556 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL20P78556 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL20P78556 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL20P78556 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL20P78556 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms