Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLRN1P58418 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.04■□□□□ -0
CLRN1P58418 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLRN1P58418 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CLRN1P58418 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLRN1P58418 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.03■□□□□ -0
CLRN1P58418 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.03■□□□□ -0
CLRN1P58418 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CLRN1P58418 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLRN1P58418 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CLRN1P58418 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CLRN1P58418 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CLRN1P58418 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CLRN1P58418 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CLRN1P58418 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
CLRN1P58418 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLRN1P58418 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLRN1P58418 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.03■□□□□ -0
CLRN1P58418 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLRN1P58418 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.03■□□□□ -0
CLRN1P58418 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.03■□□□□ -0
CLRN1P58418 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLRN1P58418 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.03■□□□□ -0
CLRN1P58418 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CLRN1P58418 KRT18P27-201ENST00000427733 1299 ntBASIC15.03■□□□□ -0
CLRN1P58418 AC018712.1-201ENST00000455767 687 ntBASIC15.03■□□□□ -0
CLRN1P58418 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.03■□□□□ -0
CLRN1P58418 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.03■□□□□ -0
CLRN1P58418 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.03■□□□□ -0
CLRN1P58418 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CLRN1P58418 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.03■□□□□ -0
CLRN1P58418 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.03■□□□□ -0
CLRN1P58418 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.03■□□□□ -0
CLRN1P58418 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.03■□□□□ -0
CLRN1P58418 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.03■□□□□ -0
CLRN1P58418 AL356488.2-201ENST00000602755 427 ntBASIC15.03■□□□□ -0
CLRN1P58418 AL031008.1-201ENST00000619963 541 ntBASIC15.03■□□□□ -0
CLRN1P58418 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.03■□□□□ -0
CLRN1P58418 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.03■□□□□ -0
CLRN1P58418 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CLRN1P58418 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CLRN1P58418 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLRN1P58418 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.03■□□□□ -0
CLRN1P58418 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLRN1P58418 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLRN1P58418 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.03■□□□□ -0
CLRN1P58418 LINC00895-201ENST00000629028 1637 ntBASIC15.03■□□□□ -0
CLRN1P58418 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLRN1P58418 AL603756.1-201ENST00000606511 2163 ntBASIC15.02■□□□□ -0
CLRN1P58418 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CLRN1P58418 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLRN1P58418 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLRN1P58418 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CLRN1P58418 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLRN1P58418 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.02■□□□□ -0
CLRN1P58418 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CLRN1P58418 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CLRN1P58418 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.02■□□□□ -0
CLRN1P58418 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CLRN1P58418 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLRN1P58418 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
CLRN1P58418 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.02■□□□□ -0
CLRN1P58418 AC002310.6-201ENST00000624451 1377 ntBASIC15.02■□□□□ -0
CLRN1P58418 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLRN1P58418 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLRN1P58418 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.02■□□□□ -0
CLRN1P58418 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.02■□□□□ -0
CLRN1P58418 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLRN1P58418 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.02■□□□□ -0
CLRN1P58418 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.02■□□□□ -0
CLRN1P58418 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLRN1P58418 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
CLRN1P58418 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
CLRN1P58418 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CLRN1P58418 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.02■□□□□ -0
CLRN1P58418 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.02■□□□□ -0
CLRN1P58418 AC073621.1-201ENST00000392730 636 ntBASIC15.02■□□□□ -0
CLRN1P58418 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.02■□□□□ -0
CLRN1P58418 HNRNPDP1-201ENST00000439535 754 ntBASIC15.02■□□□□ -0
CLRN1P58418 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CLRN1P58418 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.02■□□□□ -0
CLRN1P58418 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.02■□□□□ -0
CLRN1P58418 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.02■□□□□ -0
CLRN1P58418 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.02■□□□□ -0
CLRN1P58418 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CLRN1P58418 AL773604.1-201ENST00000617417 272 ntBASIC15.02■□□□□ -0
CLRN1P58418 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLRN1P58418 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.02□□□□□ -0.01
CLRN1P58418 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
CLRN1P58418 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLRN1P58418 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLRN1P58418 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLRN1P58418 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLRN1P58418 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLRN1P58418 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLRN1P58418 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.02□□□□□ -0.01
CLRN1P58418 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.01□□□□□ -0.01
CLRN1P58418 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms