Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.47■□□□□ 0.55
PEX3P56589 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PEX3P56589 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PEX3P56589 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PEX3P56589 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PEX3P56589 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.47■□□□□ 0.55
PEX3P56589 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PEX3P56589 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PEX3P56589 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PEX3P56589 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PEX3P56589 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.47■□□□□ 0.55
PEX3P56589 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PEX3P56589 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PEX3P56589 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.46■□□□□ 0.55
PEX3P56589 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PEX3P56589 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.46■□□□□ 0.55
PEX3P56589 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PEX3P56589 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.46■□□□□ 0.55
PEX3P56589 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PEX3P56589 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PEX3P56589 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.46■□□□□ 0.55
PEX3P56589 HTR5BP-201ENST00000430851 1154 ntBASIC18.46■□□□□ 0.55
PEX3P56589 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.46■□□□□ 0.55
PEX3P56589 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.46■□□□□ 0.55
PEX3P56589 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.46■□□□□ 0.55
PEX3P56589 AC005829.1-201ENST00000570002 483 ntBASIC18.46■□□□□ 0.55
PEX3P56589 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
PEX3P56589 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 AL009183.1-201ENST00000603760 355 ntBASIC18.46■□□□□ 0.55
PEX3P56589 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.46■□□□□ 0.55
PEX3P56589 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PEX3P56589 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PEX3P56589 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.46■□□□□ 0.55
PEX3P56589 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX3P56589 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
PEX3P56589 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PEX3P56589 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.46■□□□□ 0.54
PEX3P56589 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.45■□□□□ 0.54
PEX3P56589 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.45■□□□□ 0.54
PEX3P56589 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PEX3P56589 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PEX3P56589 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PEX3P56589 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.45■□□□□ 0.54
PEX3P56589 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.45■□□□□ 0.54
PEX3P56589 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX3P56589 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX3P56589 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.45■□□□□ 0.54
PEX3P56589 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.45■□□□□ 0.54
PEX3P56589 AC112191.1-201ENST00000523689 701 ntBASIC18.45■□□□□ 0.54
PEX3P56589 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PEX3P56589 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
PEX3P56589 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX3P56589 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PEX3P56589 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PEX3P56589 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PEX3P56589 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PEX3P56589 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.45■□□□□ 0.54
PEX3P56589 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.45■□□□□ 0.54
PEX3P56589 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.45■□□□□ 0.54
PEX3P56589 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX3P56589 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX3P56589 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.45■□□□□ 0.54
PEX3P56589 AC011676.5-201ENST00000624864 2660 ntBASIC18.45■□□□□ 0.54
PEX3P56589 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX3P56589 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PEX3P56589 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PEX3P56589 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.44■□□□□ 0.54
PEX3P56589 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PEX3P56589 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.44■□□□□ 0.54
PEX3P56589 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX3P56589 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PEX3P56589 UBALD1-205ENST00000590891 2641 ntBASIC18.44■□□□□ 0.54
PEX3P56589 FLJ38576-201ENST00000623820 2459 ntBASIC18.44■□□□□ 0.54
PEX3P56589 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.44■□□□□ 0.54
PEX3P56589 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX3P56589 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX3P56589 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX3P56589 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PEX3P56589 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX3P56589 KRT8P39-201ENST00000396270 1433 ntBASIC18.44■□□□□ 0.54
PEX3P56589 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms