Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA4P43681 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA4P43681 AC005052.1-201ENST00000625181 2492 ntBASIC16.94■□□□□ 0.3
CHRNA4P43681 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA4P43681 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA4P43681 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA4P43681 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.94■□□□□ 0.3
CHRNA4P43681 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA4P43681 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNA4P43681 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.94■□□□□ 0.3
CHRNA4P43681 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA4P43681 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNA4P43681 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA4P43681 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNA4P43681 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA4P43681 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA4P43681 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.93■□□□□ 0.3
CHRNA4P43681 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHRNA4P43681 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHRNA4P43681 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.93■□□□□ 0.3
CHRNA4P43681 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CHRNA4P43681 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CHRNA4P43681 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 HCG4B-203ENST00000450128 991 ntBASIC16.93■□□□□ 0.3
CHRNA4P43681 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHRNA4P43681 RPL13AP23-201ENST00000480739 586 ntBASIC16.93■□□□□ 0.3
CHRNA4P43681 CXCL1P1-201ENST00000502804 216 ntBASIC16.93■□□□□ 0.3
CHRNA4P43681 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA4P43681 AC145285.3-201ENST00000564603 959 ntBASIC16.93■□□□□ 0.3
CHRNA4P43681 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA4P43681 AC005412.3-201ENST00000580309 715 ntBASIC16.93■□□□□ 0.3
CHRNA4P43681 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CHRNA4P43681 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.93■□□□□ 0.3
CHRNA4P43681 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CHRNA4P43681 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA4P43681 AL512652.2-201ENST00000625156 1716 ntBASIC16.93■□□□□ 0.3
CHRNA4P43681 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA4P43681 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.92■□□□□ 0.3
CHRNA4P43681 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA4P43681 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA4P43681 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CHRNA4P43681 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA4P43681 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 CRYGEP-201ENST00000412192 528 ntBASIC16.92■□□□□ 0.3
CHRNA4P43681 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.92■□□□□ 0.3
CHRNA4P43681 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA4P43681 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA4P43681 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA4P43681 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.92■□□□□ 0.3
CHRNA4P43681 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA4P43681 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA4P43681 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
CHRNA4P43681 AC120114.3-201ENST00000611923 658 ntBASIC16.92■□□□□ 0.3
CHRNA4P43681 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.92■□□□□ 0.3
CHRNA4P43681 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.92■□□□□ 0.3
CHRNA4P43681 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA4P43681 AC092364.2-201ENST00000596710 2692 ntBASIC16.92■□□□□ 0.3
CHRNA4P43681 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA4P43681 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA4P43681 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA4P43681 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms