Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CXCL5P42830 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC11.39□□□□□ -0.59
CXCL5P42830 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CXCL5P42830 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CXCL5P42830 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CXCL5P42830 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.39□□□□□ -0.59
CXCL5P42830 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CXCL5P42830 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CXCL5P42830 AC132872.4-202ENST00000622924 2756 ntBASIC11.39□□□□□ -0.59
CXCL5P42830 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CXCL5P42830 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CXCL5P42830 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
CXCL5P42830 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.38□□□□□ -0.59
CXCL5P42830 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.38□□□□□ -0.59
CXCL5P42830 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC11.38□□□□□ -0.59
CXCL5P42830 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.38□□□□□ -0.59
CXCL5P42830 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC11.38□□□□□ -0.59
CXCL5P42830 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC11.38□□□□□ -0.59
CXCL5P42830 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CXCL5P42830 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
CXCL5P42830 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
CXCL5P42830 HBZP1-201ENST00000354915 429 ntBASIC11.38□□□□□ -0.59
CXCL5P42830 KLF4P1-201ENST00000412782 1185 ntBASIC11.38□□□□□ -0.59
CXCL5P42830 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC11.38□□□□□ -0.59
CXCL5P42830 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.38□□□□□ -0.59
CXCL5P42830 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC11.38□□□□□ -0.59
CXCL5P42830 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11.38□□□□□ -0.59
CXCL5P42830 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 AL135999.2-201ENST00000622438 1686 ntBASIC11.38□□□□□ -0.59
CXCL5P42830 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CXCL5P42830 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
CXCL5P42830 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC11.38□□□□□ -0.59
CXCL5P42830 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 GOLGA8DP-202ENST00000341390 2184 ntBASIC11.38□□□□□ -0.59
CXCL5P42830 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CXCL5P42830 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.38□□□□□ -0.59
CXCL5P42830 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
CXCL5P42830 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11.38□□□□□ -0.59
CXCL5P42830 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CXCL5P42830 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.37□□□□□ -0.59
CXCL5P42830 AC006538.1-201ENST00000567905 1585 ntBASIC11.37□□□□□ -0.59
CXCL5P42830 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC11.37□□□□□ -0.59
CXCL5P42830 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
CXCL5P42830 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC11.37□□□□□ -0.59
CXCL5P42830 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.37□□□□□ -0.59
CXCL5P42830 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.37□□□□□ -0.59
CXCL5P42830 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.37□□□□□ -0.59
CXCL5P42830 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC11.37□□□□□ -0.59
CXCL5P42830 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 VENTXP7-201ENST00000475503 772 ntBASIC11.37□□□□□ -0.59
CXCL5P42830 SNX5-210ENST00000481323 562 ntTSL 3 BASIC11.37□□□□□ -0.59
CXCL5P42830 AC092597.1-201ENST00000487352 616 ntBASIC11.37□□□□□ -0.59
CXCL5P42830 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.37□□□□□ -0.59
CXCL5P42830 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
CXCL5P42830 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.37□□□□□ -0.59
CXCL5P42830 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms