Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.72■□□□□ 0.43
RFC1P35251 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.72■□□□□ 0.43
RFC1P35251 AC116407.3-201ENST00000623905 1129 ntBASIC17.72■□□□□ 0.43
RFC1P35251 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RFC1P35251 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RFC1P35251 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.72■□□□□ 0.43
RFC1P35251 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RFC1P35251 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFC1P35251 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.71■□□□□ 0.43
RFC1P35251 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
RFC1P35251 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.71■□□□□ 0.43
RFC1P35251 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFC1P35251 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFC1P35251 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.71■□□□□ 0.43
RFC1P35251 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RFC1P35251 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.71■□□□□ 0.43
RFC1P35251 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFC1P35251 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.71■□□□□ 0.43
RFC1P35251 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RFC1P35251 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFC1P35251 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFC1P35251 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.71■□□□□ 0.43
RFC1P35251 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFC1P35251 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFC1P35251 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFC1P35251 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.71■□□□□ 0.43
RFC1P35251 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.71■□□□□ 0.43
RFC1P35251 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RFC1P35251 OR7E47P-204ENST00000575924 449 ntBASIC17.71■□□□□ 0.43
RFC1P35251 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.71■□□□□ 0.43
RFC1P35251 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.71■□□□□ 0.43
RFC1P35251 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.71■□□□□ 0.43
RFC1P35251 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFC1P35251 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFC1P35251 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFC1P35251 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RFC1P35251 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFC1P35251 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.71■□□□□ 0.43
RFC1P35251 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RFC1P35251 HLA-A-201ENST00000376802 1334 ntBASIC17.71■□□□□ 0.42
RFC1P35251 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.71■□□□□ 0.42
RFC1P35251 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RFC1P35251 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RFC1P35251 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
RFC1P35251 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
RFC1P35251 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RFC1P35251 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.7■□□□□ 0.42
RFC1P35251 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
RFC1P35251 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 AC108073.2-201ENST00000464002 357 ntBASIC17.7■□□□□ 0.42
RFC1P35251 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.7■□□□□ 0.42
RFC1P35251 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.7■□□□□ 0.42
RFC1P35251 AP001005.1-201ENST00000571755 1248 ntBASIC17.7■□□□□ 0.42
RFC1P35251 MIR4492-201ENST00000581627 80 ntBASIC17.7■□□□□ 0.42
RFC1P35251 MPDU1-223ENST00000582151 728 ntBASIC17.7■□□□□ 0.42
RFC1P35251 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
RFC1P35251 AC004790.2-201ENST00000623588 572 ntBASIC17.7■□□□□ 0.42
RFC1P35251 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RFC1P35251 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC1P35251 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC1P35251 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RFC1P35251 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC1P35251 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC1P35251 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC1P35251 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RFC1P35251 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC1P35251 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.69■□□□□ 0.42
RFC1P35251 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC1P35251 SLC22A20-204ENST00000530038 1673 ntBASIC17.69■□□□□ 0.42
RFC1P35251 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms