Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDC27P30260 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.44■□□□□ 0.7
CDC27P30260 AC023274.1-201ENST00000418278 595 ntBASIC19.44■□□□□ 0.7
CDC27P30260 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.44■□□□□ 0.7
CDC27P30260 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.44■□□□□ 0.7
CDC27P30260 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.44■□□□□ 0.7
CDC27P30260 PCDH8P1-201ENST00000428983 2773 ntBASIC19.44■□□□□ 0.7
CDC27P30260 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CDC27P30260 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.44■□□□□ 0.7
CDC27P30260 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CDC27P30260 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CDC27P30260 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC27P30260 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.44■□□□□ 0.7
CDC27P30260 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC27P30260 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC27P30260 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC27P30260 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC27P30260 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC27P30260 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC27P30260 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC27P30260 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.43■□□□□ 0.7
CDC27P30260 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CDC27P30260 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC27P30260 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CDC27P30260 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC27P30260 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDC27P30260 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC27P30260 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC27P30260 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.43■□□□□ 0.7
CDC27P30260 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC27P30260 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC27P30260 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.43■□□□□ 0.7
CDC27P30260 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC27P30260 KRT18P58-201ENST00000527480 1120 ntBASIC19.43■□□□□ 0.7
CDC27P30260 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC27P30260 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.43■□□□□ 0.7
CDC27P30260 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.43■□□□□ 0.7
CDC27P30260 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC27P30260 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC27P30260 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC27P30260 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.43■□□□□ 0.7
CDC27P30260 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CDC27P30260 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDC27P30260 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDC27P30260 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDC27P30260 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CDC27P30260 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC27P30260 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC27P30260 GGT3P-204ENST00000453783 1664 ntBASIC19.43■□□□□ 0.7
CDC27P30260 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC27P30260 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC27P30260 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.42■□□□□ 0.7
CDC27P30260 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC27P30260 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CDC27P30260 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC27P30260 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.42■□□□□ 0.7
CDC27P30260 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.42■□□□□ 0.7
CDC27P30260 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC27P30260 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDC27P30260 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC27P30260 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.42■□□□□ 0.7
CDC27P30260 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC27P30260 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.42■□□□□ 0.7
CDC27P30260 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.42■□□□□ 0.7
CDC27P30260 PDPK2P-202ENST00000562415 1191 ntBASIC19.42■□□□□ 0.7
CDC27P30260 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.42■□□□□ 0.7
CDC27P30260 AL031055.1-201ENST00000606362 631 ntBASIC19.42■□□□□ 0.7
CDC27P30260 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.42■□□□□ 0.7
CDC27P30260 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDC27P30260 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC27P30260 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC27P30260 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CDC27P30260 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC27P30260 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC27P30260 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC27P30260 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.42■□□□□ 0.7
CDC27P30260 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC27P30260 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.41■□□□□ 0.7
CDC27P30260 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 AC092364.2-201ENST00000596710 2692 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms