Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APEX1P27695 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APEX1P27695 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
APEX1P27695 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.24■□□□□ 0.03
APEX1P27695 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APEX1P27695 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APEX1P27695 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.24■□□□□ 0.03
APEX1P27695 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.24■□□□□ 0.03
APEX1P27695 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APEX1P27695 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APEX1P27695 SLC25A1P3-201ENST00000395415 828 ntBASIC15.24■□□□□ 0.03
APEX1P27695 FDX1P1-201ENST00000449115 551 ntBASIC15.24■□□□□ 0.03
APEX1P27695 AC132008.2-207ENST00000454517 770 ntBASIC15.24■□□□□ 0.03
APEX1P27695 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.24■□□□□ 0.03
APEX1P27695 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.24■□□□□ 0.03
APEX1P27695 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APEX1P27695 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APEX1P27695 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
APEX1P27695 AD001527.2-201ENST00000622994 785 ntBASIC15.24■□□□□ 0.03
APEX1P27695 DBET-201ENST00000630918 3363 ntBASIC15.24■□□□□ 0.03
APEX1P27695 AL353593.2-201ENST00000602529 1483 ntBASIC15.24■□□□□ 0.03
APEX1P27695 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
APEX1P27695 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
APEX1P27695 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.24■□□□□ 0.03
APEX1P27695 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APEX1P27695 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APEX1P27695 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.24■□□□□ 0.03
APEX1P27695 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.24■□□□□ 0.03
APEX1P27695 AL136379.1-201ENST00000623471 2642 ntBASIC15.24■□□□□ 0.03
APEX1P27695 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APEX1P27695 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APEX1P27695 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APEX1P27695 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APEX1P27695 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APEX1P27695 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.23■□□□□ 0.03
APEX1P27695 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.23■□□□□ 0.03
APEX1P27695 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.23■□□□□ 0.03
APEX1P27695 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
APEX1P27695 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.23■□□□□ 0.03
APEX1P27695 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
APEX1P27695 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.23■□□□□ 0.03
APEX1P27695 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.23■□□□□ 0.03
APEX1P27695 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
APEX1P27695 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
APEX1P27695 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.23■□□□□ 0.03
APEX1P27695 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.23■□□□□ 0.03
APEX1P27695 ABCD1P5-201ENST00000445663 754 ntBASIC15.23■□□□□ 0.03
APEX1P27695 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.23■□□□□ 0.03
APEX1P27695 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
APEX1P27695 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.23■□□□□ 0.03
APEX1P27695 AC073592.5-201ENST00000624854 528 ntBASIC15.23■□□□□ 0.03
APEX1P27695 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.23■□□□□ 0.03
APEX1P27695 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.23■□□□□ 0.03
APEX1P27695 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
APEX1P27695 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
APEX1P27695 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.23■□□□□ 0.03
APEX1P27695 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.23■□□□□ 0.03
APEX1P27695 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
APEX1P27695 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APEX1P27695 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
APEX1P27695 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.22■□□□□ 0.03
APEX1P27695 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.22■□□□□ 0.03
APEX1P27695 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
APEX1P27695 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.22■□□□□ 0.03
APEX1P27695 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
APEX1P27695 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
APEX1P27695 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.22■□□□□ 0.03
APEX1P27695 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.22■□□□□ 0.03
APEX1P27695 KLF4P1-201ENST00000412782 1185 ntBASIC15.22■□□□□ 0.03
APEX1P27695 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.22■□□□□ 0.03
APEX1P27695 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.22■□□□□ 0.03
APEX1P27695 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.22■□□□□ 0.03
APEX1P27695 STK25P1-201ENST00000585406 838 ntBASIC15.22■□□□□ 0.03
APEX1P27695 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.22■□□□□ 0.03
APEX1P27695 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.22■□□□□ 0.03
APEX1P27695 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 AL031008.1-201ENST00000619963 541 ntBASIC15.22■□□□□ 0.03
APEX1P27695 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms